Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1979404 |
| length | 283 |
| lncRNA type | read_through |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G1728051 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 32197519 ~ 32220621 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1979345 | lncRNA | upstream | 52633 | 32143164 ~ 32144886 (+) | True | LOC110501063 |
| TU1978794 | lncRNA | upstream | 518788 | 31678478 ~ 31678731 (+) | True | G1727480 |
| TU1978782 | lncRNA | upstream | 538929 | 31658355 ~ 31658590 (+) | True | G1727468 |
| TU1978739 | lncRNA | upstream | 596383 | 31600791 ~ 31601136 (+) | True | G1727427 |
| TU1978511 | lncRNA | upstream | 629358 | 31567955 ~ 31568161 (+) | True | G1727224 |
| TU1979406 | lncRNA | downstream | 15700 | 32236321 ~ 32236640 (+) | False | G1728052 |
| TU1979405 | lncRNA | downstream | 15766 | 32236387 ~ 32239087 (+) | False | G1728052 |
| TU1979407 | lncRNA | downstream | 15766 | 32236387 ~ 32236640 (+) | True | G1728052 |
| TU1979419 | lncRNA | downstream | 19355 | 32239976 ~ 32240175 (+) | True | G1728064 |
| TU1979409 | lncRNA | downstream | 20815 | 32241436 ~ 32243283 (+) | True | G1728054 |
| XM_021577509.2 | mRNA | upstream | 16916 | 32168800 ~ 32180603 (+) | True | LOC110500253 |
| XM_021577508.2 | mRNA | upstream | 35063 | 32153116 ~ 32162456 (+) | False | LOC110500252 |
| XM_036957659.1 | mRNA | upstream | 52633 | 32114413 ~ 32144886 (+) | False | LOC110501063 |
| XM_036957660.1 | mRNA | upstream | 52633 | 32114415 ~ 32144886 (+) | False | LOC110501063 |
| XM_021577503.2 | mRNA | upstream | 302975 | 31873548 ~ 31894544 (+) | True | LOC110500249 |
| XR_005038579.1 | mRNA | downstream | 10527 | 32231148 ~ 32234741 (+) | True | LOC110500255 |
| NM_001160612.2 | mRNA | downstream | 30001 | 32250622 ~ 32254298 (+) | True | arf4 |
| NM_001160545.1 | mRNA | downstream | 36859 | 32257480 ~ 32261475 (+) | True | vatf |
| XM_021577515.2 | mRNA | downstream | 89422 | 32310043 ~ 32343558 (+) | True | LOC110500258 |
| XM_021577516.2 | mRNA | downstream | 144899 | 32365520 ~ 32391529 (+) | False | LOC110500259 |
| TU1979380 | other | upstream | 35127 | 32157912 ~ 32162392 (+) | True | LOC110500252 |
| TU1979348 | other | upstream | 60823 | 32135955 ~ 32136696 (+) | False | LOC110501063 |
| TU1979347 | other | upstream | 62520 | 32114736 ~ 32134999 (+) | False | LOC110501063 |
| TU1978507 | other | upstream | 632925 | 31564135 ~ 31564594 (+) | True | G1727220 |
| TU1978468 | other | upstream | 689147 | 31508056 ~ 31508372 (+) | True | G1727181 |
| TU1980944 | other | downstream | 1100832 | 33321453 ~ 33321761 (+) | True | G1729465 |
| TU1981477 | other | downstream | 1489471 | 33710092 ~ 33868977 (+) | False | LOC110500285 |
| TU1983724 | other | downstream | 3218668 | 35439289 ~ 35484354 (+) | True | G1732028 |
| TU1984485 | other | downstream | 3820710 | 36041331 ~ 36042488 (+) | True | G1732735 |
| TU1984576 | other | downstream | 4012501 | 36233122 ~ 36236265 (+) | True | LOC110500325 |
