Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1980922 |
| length | 254 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G1729443 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 33297353 ~ 33297606 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
33,295,200
33,295,600
33,296,000
33,296,400
33,296,800
33,297,200
33,297,600
33,298,000
33,298,400
33,298,800
33,299,200
33,299,600
NC_048585.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1980921 | lncRNA | downstream | 1773 | 33295275 ~ 33295580 (-) | True | G1729442 |
| TU1980914 | lncRNA | downstream | 12437 | 33284689 ~ 33284916 (-) | True | G1729435 |
| TU1980903 | lncRNA | downstream | 28198 | 33268680 ~ 33269155 (-) | True | G1729424 |
| TU1980901 | lncRNA | downstream | 30665 | 33266455 ~ 33266688 (-) | True | G1729422 |
| TU1980900 | lncRNA | downstream | 32821 | 33264332 ~ 33264532 (-) | True | G1729421 |
| TU1980923 | lncRNA | upstream | 434 | 33298040 ~ 33298317 (-) | True | G1729444 |
| TU1980924 | lncRNA | upstream | 1627 | 33299233 ~ 33299533 (-) | True | G1729445 |
| TU1980945 | lncRNA | upstream | 23795 | 33321401 ~ 33321679 (-) | True | G1729466 |
| TU1980949 | lncRNA | upstream | 27004 | 33324610 ~ 33324895 (-) | True | G1729470 |
| TU1981266 | lncRNA | upstream | 241185 | 33538791 ~ 33539080 (-) | True | G1729768 |
| XM_021577573.2 | mRNA | downstream | 256545 | 33037901 ~ 33040808 (-) | True | LOC110500280 |
| XR_005038581.1 | mRNA | downstream | 455408 | 32834421 ~ 32841945 (-) | True | LOC118942920 |
| XM_021577563.2 | mRNA | downstream | 529514 | 32756127 ~ 32767839 (-) | False | LOC110500274 |
| XR_005038435.1 | mRNA | upstream | 2610 | 33300216 ~ 33304366 (-) | True | LOC118942783 |
| LOC110501068 | mRNA | upstream | 972655 | 34270261 ~ 34288000 (-) | False | LOC110501068 |
| LOC118936404 | mRNA | upstream | 990470 | 34288076 ~ 34292270 (-) | True | LOC118936404 |
| XM_021577583.2 | mRNA | upstream | 994460 | 34292066 ~ 34295197 (-) | True | LOC110500287 |
| XM_021577586.2 | mRNA | upstream | 1020666 | 34318272 ~ 34325044 (-) | True | LOC110500289 |
| TU1980333 | other | downstream | 692723 | 32603463 ~ 32604630 (-) | True | LOC110500269 |
| TU1980113 | other | downstream | 1027692 | 32254847 ~ 32269661 (-) | True | LOC110500257 |
| TU1980083 | other | downstream | 1128419 | 32167669 ~ 32168934 (-) | True | G1728665 |
| TU1978738 | other | downstream | 1697864 | 31599146 ~ 31599489 (-) | True | G1727426 |
| TU1978665 | other | downstream | 1805051 | 31491520 ~ 31492302 (-) | True | G1727354 |
| TU1982318 | other | upstream | 972205 | 34269811 ~ 34273352 (-) | True | LOC110501068 |
| TU1982316 | other | upstream | 1027619 | 34325225 ~ 34329576 (-) | True | G1730761 |
| TU1982420 | other | upstream | 1074671 | 34372277 ~ 34374679 (-) | True | LOC110500290 |
| TU1982739 | other | upstream | 1259574 | 34557180 ~ 34564656 (-) | False | G1731156 |
| TU1982734 | other | upstream | 1263563 | 34561169 ~ 34565175 (-) | True | G1731156 |
