Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1983402 |
| length | 238 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1731754 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 35273208 ~ 35273445 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1983241 | lncRNA | upstream | 1613 | 35271057 ~ 35271595 (+) | True | G1731599 |
| TU1983247 | lncRNA | upstream | 284207 | 34988751 ~ 34989001 (+) | True | G1731605 |
| TU1983243 | lncRNA | upstream | 289158 | 34983849 ~ 34984050 (+) | True | G1731601 |
| TU1983185 | lncRNA | upstream | 306486 | 34966492 ~ 34966722 (+) | True | G1731545 |
| TU1982999 | lncRNA | upstream | 452949 | 34819994 ~ 34820259 (+) | True | G1731373 |
| TU1983403 | lncRNA | downstream | 180 | 35273625 ~ 35273884 (+) | True | G1731755 |
| TU1983405 | lncRNA | downstream | 4393 | 35277838 ~ 35278261 (+) | True | G1731757 |
| TU1983396 | lncRNA | downstream | 15406 | 35288851 ~ 35289535 (+) | True | G1731748 |
| TU1983397 | lncRNA | downstream | 22089 | 35295534 ~ 35295920 (+) | True | G1731749 |
| TU1983666 | lncRNA | downstream | 27639 | 35301084 ~ 35301603 (+) | True | G1731975 |
| XM_021577600.2 | mRNA | upstream | 5408 | 35071370 ~ 35267800 (+) | True | LOC110500296 |
| XM_021577598.2 | mRNA | upstream | 239792 | 35029259 ~ 35033416 (+) | True | LOC110500295 |
| XM_036956493.1 | mRNA | upstream | 342037 | 34917692 ~ 34931171 (+) | True | LOC110501070 |
| XR_005038436.1 | mRNA | upstream | 480644 | 34784413 ~ 34792564 (+) | True | LOC118942784 |
| XM_021577597.2 | mRNA | upstream | 490625 | 34766720 ~ 34782583 (+) | True | LOC110500293 |
| NM_001165066.2 | mRNA | downstream | 230246 | 35503691 ~ 35510121 (+) | False | sh2d1ab |
| XR_005038438.1 | mRNA | downstream | 363142 | 35636587 ~ 35637138 (+) | True | LOC118942786 |
| XM_021577628.2 | mRNA | downstream | 515046 | 35788491 ~ 35982905 (+) | False | LOC110500322 |
| XM_021577626.2 | mRNA | downstream | 515047 | 35788492 ~ 35982905 (+) | False | LOC110500322 |
| XM_021577627.2 | mRNA | downstream | 515047 | 35788492 ~ 35982905 (+) | True | LOC110500322 |
| TU1981477 | other | upstream | 1404231 | 33710092 ~ 33868977 (+) | False | LOC110500285 |
| TU1980944 | other | upstream | 1951447 | 33321453 ~ 33321761 (+) | True | G1729465 |
| TU1979380 | other | upstream | 3110816 | 32157912 ~ 32162392 (+) | True | LOC110500252 |
| TU1979348 | other | upstream | 3136512 | 32135955 ~ 32136696 (+) | False | LOC110501063 |
| TU1979347 | other | upstream | 3138209 | 32114736 ~ 32134999 (+) | False | LOC110501063 |
| TU1983724 | other | downstream | 165844 | 35439289 ~ 35484354 (+) | True | G1732028 |
| TU1984485 | other | downstream | 767886 | 36041331 ~ 36042488 (+) | True | G1732735 |
| TU1984576 | other | downstream | 959677 | 36233122 ~ 36236265 (+) | True | LOC110500325 |
| TU1984969 | other | downstream | 1483544 | 36756989 ~ 36758883 (+) | False | G1733187 |
| TU1986149 | other | downstream | 1975182 | 37248627 ~ 37252175 (+) | False | zgc:109889 |
