Item | Value |
---|---|
RNA id | TU1987001 |
length | 336 |
lncRNA type | inter_gene |
GC content | 0.47 |
exon number | 2 |
gene id | G1735004 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 38112886 ~ 38113534 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1986983 | lncRNA | upstream | 18685 | 38093844 ~ 38094201 (+) | True | G1734990 |
TU1986982 | lncRNA | upstream | 20661 | 38091986 ~ 38092225 (+) | True | G1734989 |
TU1986981 | lncRNA | upstream | 21918 | 38090334 ~ 38090968 (+) | True | G1734988 |
TU1986942 | lncRNA | upstream | 24840 | 38087528 ~ 38088046 (+) | True | G1734959 |
TU1986938 | lncRNA | upstream | 24998 | 38087431 ~ 38087888 (+) | False | G1734959 |
TU1987011 | lncRNA | downstream | 49493 | 38163027 ~ 38164750 (+) | False | LOC110500338 |
TU1987010 | lncRNA | downstream | 51667 | 38165201 ~ 38166964 (+) | True | LOC110500338 |
TU1986986 | lncRNA | downstream | 88768 | 38202302 ~ 38203063 (+) | False | G1734991 |
TU1986987 | lncRNA | downstream | 88873 | 38202407 ~ 38203063 (+) | False | G1734991 |
TU1986988 | lncRNA | downstream | 88938 | 38202472 ~ 38203063 (+) | True | G1734991 |
XM_021577605.2 | mRNA | upstream | 28914 | 38076983 ~ 38083972 (+) | False | LOC110500301 |
XM_036957753.1 | mRNA | upstream | 62104 | 37958017 ~ 38050782 (+) | False | arhgap36 |
XM_036957755.1 | mRNA | upstream | 62104 | 37958017 ~ 38050782 (+) | False | arhgap36 |
XM_036957754.1 | mRNA | upstream | 62104 | 37993101 ~ 38050782 (+) | True | arhgap36 |
XM_036957752.1 | mRNA | upstream | 159666 | 37920291 ~ 37953220 (+) | True | nhsl2 |
XM_021577652.2 | mRNA | downstream | 19525 | 38133059 ~ 38166964 (+) | False | LOC110500338 |
XM_036957757.1 | mRNA | downstream | 181896 | 38295430 ~ 38482345 (+) | False | col4a6 |
XM_036957759.1 | mRNA | downstream | 181896 | 38295430 ~ 38482345 (+) | False | col4a6 |
XM_036957760.1 | mRNA | downstream | 181896 | 38295430 ~ 38482345 (+) | False | col4a6 |
XM_036957761.1 | mRNA | downstream | 181896 | 38295430 ~ 38482345 (+) | False | col4a6 |
TU1986976 | other | upstream | 30612 | 38077551 ~ 38082274 (+) | True | LOC110500301 |
TU1986954 | other | upstream | 66380 | 38045108 ~ 38046506 (+) | True | G1734961 |
TU1986951 | other | upstream | 67820 | 38043091 ~ 38045066 (+) | False | G1734960 |
TU1986710 | other | upstream | 349628 | 37760335 ~ 37763258 (+) | False | cited1 |
TU1986376 | other | upstream | 543933 | 37565428 ~ 37568953 (+) | True | G1734479 |
TU1987950 | other | downstream | 754433 | 38867967 ~ 38924928 (+) | True | arrb2b |
TU1988123 | other | downstream | 1065753 | 39179287 ~ 39209485 (+) | True | nat16 |
TU1988209 | other | downstream | 1120130 | 39233664 ~ 39289670 (+) | True | G1736098 |
TU1988631 | other | downstream | 1762222 | 39875756 ~ 39876950 (+) | True | G1736484 |
TU1989649 | other | downstream | 1949172 | 40062706 ~ 40063325 (+) | True | G1737353 |