Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1988248 |
| length | 907 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G1736133 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 39296062 ~ 39302368 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1988204 | lncRNA | upstream | 104208 | 39191442 ~ 39191854 (+) | True | G1736093 |
| TU1988067 | lncRNA | upstream | 117884 | 39086505 ~ 39178178 (+) | False | G1735986 |
| TU1988071 | lncRNA | upstream | 117884 | 39086505 ~ 39178178 (+) | False | G1735986 |
| TU1988072 | lncRNA | upstream | 117884 | 39086505 ~ 39178178 (+) | False | G1735986 |
| TU1988129 | lncRNA | upstream | 141540 | 39148396 ~ 39154522 (+) | True | LOC118942927 |
| TU1988269 | lncRNA | downstream | 38270 | 39340638 ~ 39362957 (+) | False | G1736154 |
| TU1988270 | lncRNA | downstream | 38270 | 39340638 ~ 39343652 (+) | False | G1736154 |
| TU1988271 | lncRNA | downstream | 38270 | 39340638 ~ 39347163 (+) | True | G1736154 |
| TU1988336 | lncRNA | downstream | 148492 | 39450860 ~ 39451178 (+) | True | G1736209 |
| TU1988509 | lncRNA | downstream | 402240 | 39704608 ~ 39705136 (+) | True | G1736377 |
| XM_021577691.2 | mRNA | upstream | 39465 | 39245831 ~ 39256597 (+) | True | nat16l |
| XM_021577692.2 | mRNA | upstream | 40048 | 39245831 ~ 39256014 (+) | False | nat16l |
| XM_021577693.2 | mRNA | upstream | 40048 | 39245831 ~ 39256014 (+) | False | nat16l |
| XM_036957789.1 | mRNA | upstream | 58145 | 39228648 ~ 39237917 (+) | False | LOC110500362 |
| XM_036957788.1 | mRNA | upstream | 58145 | 39228651 ~ 39237917 (+) | True | LOC110500362 |
| XM_021577695.2 | mRNA | downstream | 20497 | 39322865 ~ 39331908 (+) | True | LOC110500364 |
| XM_036957793.1 | mRNA | downstream | 117762 | 39420130 ~ 39453254 (+) | True | zanl |
| trnaw-cca-56 | mRNA | downstream | 268288 | 39570656 ~ 39570727 (+) | True | trnaw-cca-56 |
| XM_021577706.2 | mRNA | downstream | 292799 | 39595167 ~ 39600315 (+) | True | mpdu1b |
| XM_021577711.2 | mRNA | downstream | 371604 | 39673972 ~ 39706202 (+) | False | acox3 |
| TU1988209 | other | upstream | 6392 | 39233664 ~ 39289670 (+) | True | G1736098 |
| TU1988123 | other | upstream | 86577 | 39179287 ~ 39209485 (+) | True | nat16 |
| TU1987950 | other | upstream | 371134 | 38867967 ~ 38924928 (+) | True | arrb2b |
| TU1986976 | other | upstream | 1213788 | 38077551 ~ 38082274 (+) | True | LOC110500301 |
| TU1986954 | other | upstream | 1249556 | 38045108 ~ 38046506 (+) | True | G1734961 |
| TU1988631 | other | downstream | 573388 | 39875756 ~ 39876950 (+) | True | G1736484 |
| TU1989649 | other | downstream | 760338 | 40062706 ~ 40063325 (+) | True | G1737353 |
| TU1989857 | other | downstream | 1099136 | 40401504 ~ 40403685 (+) | True | LOC110500409 |
| TU1990244 | other | downstream | 1249643 | 40552011 ~ 40553853 (+) | True | G1737866 |
| TU1990461 | other | downstream | 1690787 | 40993155 ~ 40997320 (+) | True | G1738057 |
