RNA id: TCONS_00004855


Basic Information

Item Value
RNA id TCONS_00004855
length 117
RNA type rRNA
GC content 0.52
exon number 1
gene id XLOC_002609
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 9016721 ~ 9016837 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGCCACAGTCATATCACCTTGCAGCCTAAGACcgattactcactgaagctaagtagggctgagcctggtcagtacctggatgggaggccacatgggaaaacaaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000185588

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006000 lncRNA downstream 158153 8841698 ~ 8858568 (-) True XLOC_002606
TCONS_00005999 lncRNA downstream 158172 8841698 ~ 8858549 (-) False XLOC_002606
TCONS_00005998 lncRNA downstream 359044 8638921 ~ 8657677 (-) True XLOC_002603
TCONS_00005997 lncRNA downstream 395178 8618718 ~ 8621543 (-) False XLOC_002602
TCONS_00004846 lncRNA downstream 395448 8618849 ~ 8621273 (-) True XLOC_002602
TCONS_00006001 lncRNA upstream 128671 9145508 ~ 9146642 (-) True XLOC_002612
TCONS_00006002 lncRNA upstream 173260 9190097 ~ 9191755 (-) True XLOC_002613
TCONS_00004863 lncRNA upstream 247836 9264673 ~ 9269249 (-) False XLOC_002614
TCONS_00004864 lncRNA upstream 247836 9264673 ~ 9269711 (-) True XLOC_002614
TCONS_00005750 lncRNA upstream 249216 9266053 ~ 9267711 (-) True XLOC_002615
TCONS_00004850 mRNA downstream 59241 8947228 ~ 8957480 (-) False XLOC_002607
TCONS_00004853 mRNA downstream 59748 8955287 ~ 8956973 (-) True XLOC_002607
TCONS_00004851 mRNA downstream 59942 8947230 ~ 8956779 (-) False XLOC_002607
TCONS_00004849 mRNA downstream 59979 8947228 ~ 8956742 (-) False XLOC_002607
TCONS_00004852 mRNA downstream 61308 8947348 ~ 8955413 (-) False XLOC_002607
TCONS_00004857 mRNA upstream 20534 9037371 ~ 9086716 (-) True XLOC_002608
TCONS_00004858 mRNA upstream 88170 9105007 ~ 9115383 (-) True XLOC_002610
TCONS_00004860 mRNA upstream 169814 9186651 ~ 9190831 (-) False XLOC_002613
TCONS_00004861 mRNA upstream 173228 9190065 ~ 9192450 (-) False XLOC_002613
TCONS_00004862 mRNA upstream 230756 9247593 ~ 9269733 (-) False XLOC_002614
TCONS_00004848 other downstream 338893 8675890 ~ 8677828 (-) True XLOC_002605
TCONS_00004819 other downstream 1056883 7929771 ~ 7959838 (-) True XLOC_002588
TCONS_00004811 other downstream 1124037 7870627 ~ 7892684 (-) False XLOC_002585
TCONS_00004813 other downstream 1124855 7881329 ~ 7891866 (-) True XLOC_002585
TCONS_00004790 other downstream 1504598 7512008 ~ 7512123 (-) True XLOC_002575
TCONS_00004856 other upstream 20521 9037358 ~ 9089636 (-) False XLOC_002608
TCONS_00004859 other upstream 124728 9141565 ~ 9141679 (-) True XLOC_002611
TCONS_00004869 other upstream 517945 9534782 ~ 9538326 (-) False XLOC_002618
TCONS_00004879 other upstream 1302471 10319308 ~ 10332427 (-) False XLOC_002623
TCONS_00004880 other upstream 1312627 10329464 ~ 10329554 (-) True XLOC_002623