RNA id: TCONS_00051046



Basic Information


Item Value
RNA id TCONS_00051046
length 119
RNA type rRNA
GC content 0.47
exon number 1
gene id XLOC_026134
representative True

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 10187033 ~ 10187151 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


ttttaaaactaaaacgcactagtgtaaacggggccaaagtaaccggctgaagctaagcagggctgcgcccgttAAGtaactgaatgggagaccacatgggaaatgagtggtgttagtga

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000161656

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00052950 lncRNA downstream 49892 10062188 ~ 10137141 (-) True XLOC_026132
TCONS_00052949 lncRNA downstream 50190 10062188 ~ 10136843 (-) False XLOC_026132
TCONS_00052948 lncRNA downstream 52278 10060972 ~ 10134755 (-) True XLOC_026131
TCONS_00052436 lncRNA downstream 161403 10018357 ~ 10025630 (-) True XLOC_026130
TCONS_00051044 lncRNA downstream 172458 9984415 ~ 10014575 (-) True XLOC_026129
TCONS_00052951 lncRNA upstream 65008 10252159 ~ 10393828 (-) True XLOC_026136
TCONS_00052437 lncRNA upstream 123055 10310206 ~ 10312252 (-) True XLOC_026137
TCONS_00052438 lncRNA upstream 336299 10523450 ~ 10529896 (-) False XLOC_026139
TCONS_00052439 lncRNA upstream 342189 10529340 ~ 10529896 (-) True XLOC_026139
TCONS_00052952 lncRNA upstream 497171 10684322 ~ 10711294 (-) True XLOC_026143
TCONS_00051040 mRNA downstream 448048 9737490 ~ 9738985 (-) True XLOC_026124
TCONS_00051039 mRNA downstream 464430 9634777 ~ 9722603 (-) True XLOC_026122
TCONS_00051038 mRNA downstream 615724 9564237 ~ 9571309 (-) True XLOC_026121
TCONS_00051036 mRNA downstream 617772 9542168 ~ 9569261 (-) False XLOC_026121
TCONS_00051048 mRNA upstream 122939 10310090 ~ 10312232 (-) False XLOC_026137
TCONS_00051049 mRNA upstream 220307 10407458 ~ 10425313 (-) True XLOC_026138
TCONS_00051050 mRNA upstream 348806 10535957 ~ 10582384 (-) False XLOC_026140
TCONS_00051052 mRNA upstream 387032 10574183 ~ 10582384 (-) True XLOC_026140
TCONS_00051053 mRNA upstream 405446 10592597 ~ 10634438 (-) False XLOC_026141
TCONS_00051045 other downstream 680 10179191 ~ 10186353 (-) True XLOC_026133
TCONS_00051043 other downstream 272644 9914272 ~ 9914389 (-) True XLOC_026128
TCONS_00051030 other downstream 1155266 9031619 ~ 9031767 (-) True XLOC_026115
TCONS_00051029 other downstream 1162481 9024485 ~ 9024552 (-) True XLOC_026114
TCONS_00051028 other downstream 1252557 8933639 ~ 8934476 (-) True XLOC_026113
TCONS_00051047 other upstream 25947 10213098 ~ 10213220 (-) True XLOC_026135
TCONS_00051051 other upstream 349323 10536474 ~ 10548477 (-) False XLOC_026140
TCONS_00051071 other upstream 1171367 11358518 ~ 11362383 (-) True XLOC_026160
TCONS_00051073 other upstream 1210118 11397269 ~ 11401300 (-) True XLOC_026162
TCONS_00051092 other upstream 2738451 12925602 ~ 12932891 (-) False XLOC_026180