Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1990304 |
| length | 1048 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G1737923 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 40654780 ~ 40682814 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1990243 | lncRNA | upstream | 104160 | 40548194 ~ 40550620 (+) | True | G1737865 |
| TU1990216 | lncRNA | upstream | 133936 | 40515981 ~ 40520844 (+) | False | G1737845 |
| TU1990330 | lncRNA | downstream | 2806 | 40685620 ~ 40685833 (+) | True | G1737936 |
| TU1990317 | lncRNA | downstream | 13745 | 40696559 ~ 40805544 (+) | True | G1737928 |
| TU1990308 | lncRNA | downstream | 81479 | 40764293 ~ 40766271 (+) | False | G1737927 |
| TU1990313 | lncRNA | downstream | 81479 | 40764293 ~ 40792490 (+) | False | G1737927 |
| TU1990314 | lncRNA | downstream | 81479 | 40764293 ~ 40779045 (+) | False | G1737927 |
| XR_002470100.2 | mRNA | upstream | 249940 | 40401452 ~ 40404840 (+) | False | LOC110500409 |
| XM_021577764.2 | mRNA | upstream | 301891 | 40322170 ~ 40352889 (+) | False | LOC110500405 |
| XM_021577765.2 | mRNA | upstream | 301891 | 40322172 ~ 40352889 (+) | True | LOC110500405 |
| XR_005038601.1 | mRNA | upstream | 397735 | 40255990 ~ 40257045 (+) | True | LOC118942929 |
| XM_036957813.1 | mRNA | upstream | 460306 | 40166131 ~ 40194474 (+) | True | LOC110500400 |
| XR_002470101.2 | mRNA | downstream | 111635 | 40794449 ~ 40837182 (+) | True | LOC110500418 |
| XM_021577792.2 | mRNA | downstream | 164178 | 40846992 ~ 40855143 (+) | False | LOC110500419 |
| XM_021577798.2 | mRNA | downstream | 367375 | 41050189 ~ 41058764 (+) | True | LOC110500424 |
| XM_021577800.2 | mRNA | downstream | 425632 | 41108446 ~ 41125926 (+) | False | LOC110500425 |
| XM_021577799.2 | mRNA | downstream | 425632 | 41108446 ~ 41125934 (+) | False | LOC110500425 |
| TU1990244 | other | upstream | 100927 | 40552011 ~ 40553853 (+) | True | G1737866 |
| TU1989857 | other | upstream | 251095 | 40401504 ~ 40403685 (+) | True | LOC110500409 |
| TU1989649 | other | upstream | 591455 | 40062706 ~ 40063325 (+) | True | G1737353 |
| TU1988631 | other | upstream | 777830 | 39875756 ~ 39876950 (+) | True | G1736484 |
| TU1988209 | other | upstream | 1365110 | 39233664 ~ 39289670 (+) | True | G1736098 |
| TU1990461 | other | downstream | 310341 | 40993155 ~ 40997320 (+) | True | G1738057 |
| TU1990529 | other | downstream | 341896 | 41024710 ~ 41029136 (+) | True | G1738119 |
| TU1991654 | other | downstream | 1205997 | 41888811 ~ 41891367 (+) | False | G1739103 |
| TU1991652 | other | downstream | 1212515 | 41895329 ~ 41897856 (+) | True | G1739103 |
| TU1991899 | other | downstream | 1602242 | 42285056 ~ 42288500 (+) | True | cxcl8c |
