Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1990453 |
| length | 787 |
| lncRNA type | inter_gene |
| GC content | 0.57 |
| exon number | 1 |
| gene id | G1738050 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 40911155 ~ 40911941 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1990452 | lncRNA | upstream | 637 | 40909841 ~ 40910518 (+) | True | G1738049 |
| TU1990451 | lncRNA | upstream | 1629 | 40908741 ~ 40909526 (+) | True | G1738048 |
| TU1990450 | lncRNA | upstream | 2483 | 40908223 ~ 40908672 (+) | True | G1738047 |
| TU1990437 | lncRNA | upstream | 54429 | 40856590 ~ 40856726 (+) | True | G1738034 |
| TU1990438 | lncRNA | upstream | 56301 | 40854333 ~ 40854854 (+) | True | LOC110500419 |
| TU1990458 | lncRNA | downstream | 11434 | 40923375 ~ 40926290 (+) | True | G1738055 |
| TU1990460 | lncRNA | downstream | 43109 | 40955050 ~ 40997320 (+) | False | G1738057 |
| TU1990568 | lncRNA | downstream | 220286 | 41132227 ~ 41132653 (+) | True | G1738157 |
| TU1990574 | lncRNA | downstream | 226471 | 41138412 ~ 41138653 (+) | True | G1738163 |
| TU1990577 | lncRNA | downstream | 230275 | 41142216 ~ 41142433 (+) | True | G1738166 |
| XM_021577792.2 | mRNA | upstream | 56012 | 40846992 ~ 40855143 (+) | False | LOC110500419 |
| XR_002470101.2 | mRNA | upstream | 73973 | 40794449 ~ 40837182 (+) | True | LOC110500418 |
| XR_002470100.2 | mRNA | upstream | 506315 | 40401452 ~ 40404840 (+) | False | LOC110500409 |
| XM_021577764.2 | mRNA | upstream | 558266 | 40322170 ~ 40352889 (+) | False | LOC110500405 |
| XM_021577798.2 | mRNA | downstream | 138248 | 41050189 ~ 41058764 (+) | True | LOC110500424 |
| XM_021577800.2 | mRNA | downstream | 196505 | 41108446 ~ 41125926 (+) | False | LOC110500425 |
| XM_021577799.2 | mRNA | downstream | 196505 | 41108446 ~ 41125934 (+) | False | LOC110500425 |
| XM_021577801.2 | mRNA | downstream | 196547 | 41108488 ~ 41125926 (+) | True | LOC110500425 |
| XM_036957838.1 | mRNA | downstream | 218885 | 41130826 ~ 41183998 (+) | False | LOC110500427 |
| TU1990244 | other | upstream | 357302 | 40552011 ~ 40553853 (+) | True | G1737866 |
| TU1989857 | other | upstream | 507470 | 40401504 ~ 40403685 (+) | True | LOC110500409 |
| TU1989649 | other | upstream | 847830 | 40062706 ~ 40063325 (+) | True | G1737353 |
| TU1988631 | other | upstream | 1034205 | 39875756 ~ 39876950 (+) | True | G1736484 |
| TU1988209 | other | upstream | 1621485 | 39233664 ~ 39289670 (+) | True | G1736098 |
| TU1990461 | other | downstream | 81214 | 40993155 ~ 40997320 (+) | True | G1738057 |
| TU1990529 | other | downstream | 112769 | 41024710 ~ 41029136 (+) | True | G1738119 |
| TU1991654 | other | downstream | 976870 | 41888811 ~ 41891367 (+) | False | G1739103 |
| TU1991652 | other | downstream | 983388 | 41895329 ~ 41897856 (+) | True | G1739103 |
| TU1991899 | other | downstream | 1373115 | 42285056 ~ 42288500 (+) | True | cxcl8c |
