Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1992987 |
| length | 278 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1740274 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 43169263 ~ 43169540 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1992907 | lncRNA | upstream | 7571 | 43158688 ~ 43161692 (+) | False | LOC110500494 |
| TU1992905 | lncRNA | upstream | 7571 | 43158820 ~ 43161692 (+) | False | LOC110500494 |
| TU1992904 | lncRNA | upstream | 7571 | 43158860 ~ 43161692 (+) | True | LOC110500494 |
| TU1992923 | lncRNA | upstream | 180982 | 42987765 ~ 42988281 (+) | True | G1740211 |
| TU1992922 | lncRNA | upstream | 183886 | 42985101 ~ 42985377 (+) | True | G1740210 |
| TU1992989 | lncRNA | downstream | 1836 | 43171376 ~ 43171589 (+) | True | G1740276 |
| TU1993022 | lncRNA | downstream | 30367 | 43199907 ~ 43200289 (+) | True | G1740299 |
| TU1993024 | lncRNA | downstream | 32882 | 43202422 ~ 43202626 (+) | True | G1740301 |
| TU1993068 | lncRNA | downstream | 158855 | 43328395 ~ 43328602 (+) | True | G1740335 |
| TU1993069 | lncRNA | downstream | 159363 | 43328903 ~ 43329165 (+) | True | G1740336 |
| LOC110500494 | mRNA | upstream | 7570 | 43158857 ~ 43161693 (+) | False | LOC110500494 |
| XM_021577886.2 | mRNA | upstream | 24840 | 43112790 ~ 43144423 (+) | False | LOC110500490 |
| XM_036957904.1 | mRNA | upstream | 24840 | 43112790 ~ 43144423 (+) | True | LOC110500490 |
| XR_005038755.1 | mRNA | upstream | 47070 | 43122092 ~ 43122193 (+) | True | LOC118943019 |
| XR_005038753.1 | mRNA | upstream | 50535 | 43118610 ~ 43118728 (+) | True | LOC118943016 |
| XM_021577891.2 | mRNA | downstream | 33999 | 43203539 ~ 43219682 (+) | True | LOC110500496 |
| XM_036956512.1 | mRNA | downstream | 52799 | 43222339 ~ 43232208 (+) | True | LOC118942803 |
| XM_021577892.2 | mRNA | downstream | 65106 | 43234646 ~ 43245107 (+) | True | LOC110500497 |
| XR_002470116.2 | mRNA | downstream | 97517 | 43267057 ~ 43268142 (+) | False | LOC110500499 |
| XM_021577894.2 | mRNA | downstream | 99070 | 43268610 ~ 43278166 (+) | False | LOC110500500 |
| TU1992021 | other | upstream | 666906 | 42501349 ~ 42502357 (+) | True | G1739440 |
| TU1991912 | other | upstream | 813936 | 42354577 ~ 42355327 (+) | True | si:dkey-185m8.2 |
| TU1991899 | other | upstream | 880763 | 42285056 ~ 42288500 (+) | True | cxcl8c |
| TU1991652 | other | upstream | 1271407 | 41895329 ~ 41897856 (+) | True | G1739103 |
| TU1991654 | other | upstream | 1277896 | 41888811 ~ 41891367 (+) | False | G1739103 |
| TU1993038 | other | downstream | 86113 | 43255653 ~ 43327738 (+) | True | G1740312 |
| TU1993035 | other | downstream | 97674 | 43267214 ~ 43268143 (+) | False | LOC110500499 |
| TU1993034 | other | downstream | 97791 | 43267331 ~ 43268143 (+) | True | LOC110500499 |
| TU1993101 | other | downstream | 219649 | 43389189 ~ 43390299 (+) | True | G1740366 |
| TU1993150 | other | downstream | 277510 | 43447050 ~ 43451167 (+) | False | G1740398 |
