Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1993532 |
| length | 435 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1740735 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 44170831 ~ 44171265 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1993528 | lncRNA | upstream | 10764 | 44159830 ~ 44160067 (+) | True | G1740731 |
| TU1993457 | lncRNA | upstream | 120066 | 44047717 ~ 44050765 (+) | True | LOC110500517 |
| TU1993468 | lncRNA | upstream | 123741 | 44046776 ~ 44047090 (+) | False | LOC110500517 |
| TU1993469 | lncRNA | upstream | 124570 | 44045628 ~ 44046261 (+) | False | LOC110500517 |
| TU1993478 | lncRNA | upstream | 127393 | 44043225 ~ 44043438 (+) | True | G1740699 |
| TU1993533 | lncRNA | downstream | 1744 | 44173009 ~ 44173251 (+) | True | G1740736 |
| TU1993535 | lncRNA | downstream | 3927 | 44175192 ~ 44177709 (+) | False | G1740738 |
| TU1993536 | lncRNA | downstream | 3927 | 44175192 ~ 44179638 (+) | False | G1740738 |
| TU1993537 | lncRNA | downstream | 6550 | 44177815 ~ 44181626 (+) | True | G1740738 |
| TU1993540 | lncRNA | downstream | 18714 | 44189979 ~ 44190321 (+) | True | G1740739 |
| XM_021577926.2 | mRNA | upstream | 16762 | 44126082 ~ 44154069 (+) | False | LOC110500520 |
| XM_021577925.2 | mRNA | upstream | 16762 | 44149056 ~ 44154069 (+) | True | LOC110500520 |
| XM_021577931.2 | mRNA | upstream | 42778 | 44126674 ~ 44128053 (+) | True | ufsp1 |
| XM_021577921.2 | mRNA | upstream | 70905 | 44097937 ~ 44099926 (+) | False | pop7 |
| XM_021577935.2 | mRNA | downstream | 274921 | 44446186 ~ 44451532 (+) | False | LOC110500528 |
| XM_036957940.1 | mRNA | downstream | 290073 | 44461338 ~ 44480565 (+) | False | LOC110500529 |
| XM_021577936.2 | mRNA | downstream | 290074 | 44461339 ~ 44480565 (+) | False | LOC110500529 |
| XR_005038612.1 | mRNA | downstream | 366679 | 44537944 ~ 44556711 (+) | False | LOC110500530 |
| XR_005038613.1 | mRNA | downstream | 382930 | 44554195 ~ 44556703 (+) | True | LOC110500530 |
| TU1993210 | other | upstream | 644105 | 43524736 ~ 43526726 (+) | True | G1740453 |
| TU1993165 | other | upstream | 700506 | 43469818 ~ 43470325 (+) | True | G1740412 |
| TU1993150 | other | upstream | 719664 | 43447050 ~ 43451167 (+) | False | G1740398 |
| TU1993149 | other | upstream | 719664 | 43450422 ~ 43451167 (+) | True | G1740398 |
| TU1993101 | other | upstream | 780532 | 43389189 ~ 43390299 (+) | True | G1740366 |
| TU1993553 | other | downstream | 41521 | 44212786 ~ 44213230 (+) | True | G1740752 |
| TU1994546 | other | downstream | 275295 | 44446560 ~ 44451532 (+) | True | LOC110500528 |
| TU1994553 | other | downstream | 290117 | 44461382 ~ 44472564 (+) | False | LOC110500529 |
| TU1995329 | other | downstream | 1273262 | 45444527 ~ 45448687 (+) | True | fcer1g |
| TU1995333 | other | downstream | 1314007 | 45485272 ~ 45493952 (+) | True | LOC110500870 |
