Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1996268 |
| length | 1182 |
| lncRNA type | antisense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G1743202 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 45928826 ~ 45930122 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1996223 | lncRNA | upstream | 574 | 45891897 ~ 45928329 (+) | True | G1743166 |
| TU1996162 | lncRNA | upstream | 135077 | 45785850 ~ 45793826 (+) | True | G1743112 |
| TU1996148 | lncRNA | upstream | 199698 | 45728890 ~ 45729205 (+) | True | G1743100 |
| TU1996147 | lncRNA | upstream | 200143 | 45728500 ~ 45728760 (+) | True | G1743099 |
| TU1996146 | lncRNA | upstream | 200942 | 45727476 ~ 45727961 (+) | True | G1743098 |
| TU1996337 | lncRNA | downstream | 89931 | 46020053 ~ 46020533 (+) | True | LOC110500591 |
| TU1996756 | lncRNA | downstream | 239297 | 46169419 ~ 46171765 (+) | True | LOC110500595 |
| TU1996784 | lncRNA | downstream | 253178 | 46183300 ~ 46183714 (+) | True | G1743648 |
| TU1996790 | lncRNA | downstream | 261093 | 46191215 ~ 46192309 (+) | True | G1743654 |
| TU1996798 | lncRNA | downstream | 268377 | 46198499 ~ 46198707 (+) | True | G1743660 |
| XM_036957984.1 | mRNA | upstream | 40246 | 45869887 ~ 45888657 (+) | False | LOC110500584 |
| XM_036957985.1 | mRNA | upstream | 40246 | 45869887 ~ 45888657 (+) | False | LOC110500584 |
| XM_036957986.1 | mRNA | upstream | 40246 | 45869887 ~ 45888657 (+) | True | LOC110500584 |
| XM_021577999.2 | mRNA | upstream | 78896 | 45848186 ~ 45850007 (+) | True | cnpy4 |
| XM_021577991.2 | mRNA | upstream | 173535 | 45744628 ~ 45755368 (+) | True | LOC110500577 |
| XM_021578003.2 | mRNA | downstream | 12035 | 45942157 ~ 45944870 (+) | True | LOC110500588 |
| XM_021578009.2 | mRNA | downstream | 86300 | 46016422 ~ 46020567 (+) | False | LOC110500591 |
| XM_021578013.2 | mRNA | downstream | 221319 | 46151441 ~ 46172393 (+) | False | LOC110500595 |
| XM_021578034.2 | mRNA | downstream | 271709 | 46201831 ~ 46207380 (+) | False | LOC110500598 |
| XM_021578021.2 | mRNA | downstream | 271716 | 46201838 ~ 46210557 (+) | False | LOC110500598 |
| TU1996124 | other | upstream | 218953 | 45707142 ~ 45709950 (+) | True | G1743077 |
| TU1996084 | other | upstream | 289161 | 45639296 ~ 45639742 (+) | True | G1743043 |
| TU1995371 | other | upstream | 373314 | 45549117 ~ 45555589 (+) | True | si:dkey-38p12.3 |
| TU1995333 | other | upstream | 434951 | 45485272 ~ 45493952 (+) | True | LOC110500870 |
| TU1995329 | other | upstream | 480216 | 45444527 ~ 45448687 (+) | True | fcer1g |
| TU1997842 | other | downstream | 1233782 | 47163904 ~ 47167654 (+) | True | G1744645 |
| TU1999487 | other | downstream | 2164645 | 48094767 ~ 48095119 (+) | True | G1746210 |
| TU1999753 | other | downstream | 2394978 | 48325100 ~ 48363926 (+) | True | G1746471 |
| TU2000589 | other | downstream | 3047204 | 48977326 ~ 48977758 (+) | True | G1747255 |
| TU2001181 | other | downstream | 3515717 | 49445839 ~ 49446626 (+) | True | G1747814 |
