RNA id: TU2014093



Basic Information


Item Value
RNA id TU2014093
length 626
RNA type TUCP
GC content 0.50
exon number 2
gene id G1758890
representative True

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 60122542 ~ 60123364 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gaggctatatacaggggttaccggtacagagtcaatgtggaggctatatacagggggcaccggcacagagtcaatgtggaggctatatacagggggcaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatagaggggataccggtacagagtcaatgtggaggctatatacaggggttaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggagactatatacagggggtactggtacagagtcaatgtggaggctatatacaggggttaccggtacagagtcaatgtggaggctatatacagggggtacaggtacagaatcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatggggtggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggttaccggtacagagtcaatgtggaggctatatacattgggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2014041 lncRNA downstream 14456 60043797 ~ 60108086 (-) True G1758849
TU2014040 lncRNA downstream 21112 60042706 ~ 60101430 (-) False G1758849
TU2014055 lncRNA downstream 29987 60088282 ~ 60092555 (-) True G1758854
TU2014035 lncRNA downstream 88657 60023094 ~ 60033885 (-) True G1758844
TU2014034 lncRNA downstream 93143 60019022 ~ 60029399 (-) False G1758844
TU2014097 lncRNA upstream 5483 60128847 ~ 60132714 (-) True G1758894
TU2014104 lncRNA upstream 16221 60139585 ~ 60143212 (-) True trnay-gua-295
TU2014101 lncRNA upstream 17773 60141137 ~ 60150736 (-) True trnay-gua-292
TU2014106 lncRNA upstream 19453 60142817 ~ 60149889 (-) True G1758900
TU2014141 lncRNA upstream 75348 60198712 ~ 60199064 (-) True G1758922
NM_001171854.1 mRNA downstream 177467 59941937 ~ 59945075 (-) True LOC100329196
XM_021578324.2 mRNA downstream 180707 59918360 ~ 59941835 (-) False LOC110500790
XM_036956478.1 mRNA downstream 216917 59896373 ~ 59905625 (-) True stl1
NM_001124195.1 mRNA downstream 217046 59896373 ~ 59905496 (-) False stl1
XM_036958300.1 mRNA downstream 241995 59864711 ~ 59880547 (-) True mfsd8
trnay-gua-290 mRNA upstream 15727 60139091 ~ 60139177 (-) True trnay-gua-290
trnay-gua-291 mRNA upstream 17066 60140430 ~ 60140516 (-) True trnay-gua-291
trnay-gua-292 mRNA upstream 17730 60141094 ~ 60141180 (-) False trnay-gua-292
trnay-gua-293 mRNA upstream 18394 60141758 ~ 60141844 (-) True trnay-gua-293
trnay-gua-294 mRNA upstream 19070 60142434 ~ 60142520 (-) True trnay-gua-294
TU2014036 other downstream 97639 60023767 ~ 60024903 (-) True G1758845
TU2013080 other downstream 927052 59192432 ~ 59195490 (-) True G1758095
TU2012593 other downstream 1316717 58800174 ~ 58805825 (-) True G1757692
TU2011956 other downstream 2079485 58042650 ~ 58043057 (-) False G1757130
TU2011873 other downstream 2213408 57908139 ~ 57909134 (-) True G1757074
TU2014124 other upstream 65046 60188410 ~ 60225587 (-) True G1758915
TU2014196 other upstream 235466 60358830 ~ 60359352 (-) False LOC118942962
TU2014199 other upstream 236061 60359425 ~ 60369982 (-) False LOC118942962
TU2014200 other upstream 236061 60359425 ~ 60370197 (-) True LOC118942962
TU2014361 other upstream 405023 60528387 ~ 60528790 (-) True G1759103

Expression Profile