Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2018141 |
| length | 1919 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G1761766 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 64233966 ~ 64236453 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
64,233,000
64,234,000
64,235,000
64,236,000
64,237,000
64,238,000
64,239,000
64,240,000
64,241,000
NC_048585.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2018161 | lncRNA | downstream | 24899 | 64206960 ~ 64209216 (-) | True | G1761772 |
| TU2018124 | lncRNA | downstream | 51167 | 64179410 ~ 64182948 (-) | True | G1761754 |
| TU2018123 | lncRNA | downstream | 52443 | 64180705 ~ 64181672 (-) | True | G1761753 |
| TU2018094 | lncRNA | downstream | 119643 | 64111526 ~ 64114472 (-) | True | G1761733 |
| TU2018088 | lncRNA | downstream | 131518 | 64101829 ~ 64102597 (-) | True | G1761730 |
| TU2018173 | lncRNA | upstream | 44997 | 64281450 ~ 64283850 (-) | True | G1761783 |
| TU2018182 | lncRNA | upstream | 77321 | 64313774 ~ 64314378 (-) | True | G1761790 |
| TU2018185 | lncRNA | upstream | 81381 | 64317834 ~ 64318217 (-) | True | G1761792 |
| TU2018137 | lncRNA | upstream | 112306 | 64348759 ~ 64381392 (-) | True | corin |
| TU2018215 | lncRNA | upstream | 141993 | 64378446 ~ 64379352 (-) | True | G1761814 |
| XM_036958421.1 | mRNA | downstream | 10476 | 64205352 ~ 64223639 (-) | False | LOC110517683 |
| XR_005038735.1 | mRNA | downstream | 10476 | 64205352 ~ 64223639 (-) | False | LOC110517683 |
| XR_005038736.1 | mRNA | downstream | 10476 | 64206385 ~ 64223639 (-) | False | LOC110517683 |
| XM_036958420.1 | mRNA | downstream | 57683 | 64148054 ~ 64176432 (-) | True | LOC110509411 |
| XM_036956537.1 | mRNA | downstream | 109296 | 64100432 ~ 64124819 (-) | True | LOC110510319 |
| XM_036958423.1 | mRNA | upstream | 1079 | 64237532 ~ 64381441 (-) | False | corin |
| XM_036958424.1 | mRNA | upstream | 148463 | 64384916 ~ 64480987 (-) | False | nfxl1 |
| XM_036958427.1 | mRNA | upstream | 150108 | 64386561 ~ 64387808 (-) | True | LOC118942981 |
| XM_036958425.1 | mRNA | upstream | 151706 | 64388159 ~ 64480987 (-) | False | nfxl1 |
| XM_036958426.1 | mRNA | upstream | 152429 | 64388882 ~ 64480987 (-) | True | nfxl1 |
| TU2018157 | other | downstream | 10627 | 64220922 ~ 64223488 (-) | True | LOC110517683 |
| TU2018153 | other | downstream | 27610 | 64205377 ~ 64206505 (-) | False | LOC110517683 |
| TU2018239 | other | upstream | 180857 | 64417310 ~ 64418052 (-) | True | G1761826 |
| TU2018436 | other | upstream | 354154 | 64590607 ~ 64626515 (-) | False | LOC110509409 |
| TU2018442 | other | upstream | 390192 | 64626645 ~ 64633733 (-) | True | LOC110509409 |
| TU2018636 | other | upstream | 512051 | 64748504 ~ 64749274 (-) | True | G1762080 |
| TU2018643 | other | upstream | 517254 | 64753707 ~ 64754499 (-) | False | G1762085 |
