RNA id: TU2018644


Basic Information

Item Value
RNA id TU2018644
length 774
RNA type TUCP
GC content 0.59
exon number 1
gene id G1762085
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 64753707 ~ 64754499 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tctctctccgtgcaGAGCTGGATGGCTCCCAGGAAGGGTCTTCCAGATGCCGTGACTTATATTTCCTCTTCCCACCCGGCTTGTCGGAGCGTGGGGAATGTCGGGAATGCTGTCTGTGTACAGAGAGATGGGACAGGGAGCTGGAGGAAGAGAGGCTGTCAGAGGACCGGGAATGCCGGTGTTCCCCAGGAGATTCTGGTCCTCGCTGGCTACTCCGGGATAAGGACGGGGAATGGGATAGGACGCTGTTTTCCGGACTAAAGAATATTCCCGTGTTAGAATATTGGGACCTGGCTGGTTCATATggaatcctttctctctctctacctctgctcctctcacttcctccactggtctctctcctgtgctCTCTGCTGTGTTGTCTGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTGTCGTGGGAGCCTCTTCCTTTCTCCCGTCTCCTTTTCTCCCGCTCTCTCGCCCGTCTCTTCCGGCGCCGTTCCTGGCTGCTGTCGTCGCTCCGTACGGACACGGGGCTCCGTGCTGACCAGCTCCGTTCAGAACTCCTGGACCGACCGGACCGCGACCAAACGCTCGCTGACCGATGTCTGCTTCTGGACCGCGATCCTGAACACGACCGCTCTCGGTGTctgccctcccttctctcccctagAGGGGAATAGAGCAGTCTCTCTtctacctgctctctctctctgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2018596 lncRNA downstream 39769 64663711 ~ 64713957 (-) False LOC118942818
TU2018654 lncRNA upstream 13031 64767530 ~ 64770118 (-) False G1762093
TU2018655 lncRNA upstream 13031 64767530 ~ 64771665 (-) False G1762093
TU2018656 lncRNA upstream 13031 64767530 ~ 64771665 (-) True G1762093
TU2018651 lncRNA upstream 17756 64772255 ~ 64772569 (-) True G1762091
TU2018652 lncRNA upstream 18365 64772864 ~ 64773751 (-) True G1762092
XM_036956539.1 mRNA downstream 29942 64713822 ~ 64723784 (-) False LOC118942818
XM_036958438.1 mRNA downstream 105921 64591756 ~ 64647805 (-) False LOC110509409
XM_036958437.1 mRNA downstream 105922 64591756 ~ 64647804 (-) False LOC110509409
XR_005038737.1 mRNA downstream 105982 64594629 ~ 64647744 (-) False LOC110509409
XM_036958435.1 mRNA downstream 105986 64591756 ~ 64647740 (-) False LOC110509409
XM_036958443.1 mRNA upstream 22067 64776566 ~ 64790358 (-) True LOC118942984
XM_036956541.1 mRNA upstream 168990 64923489 ~ 64930766 (-) True LOC118942819
TU2018636 other downstream 4452 64748504 ~ 64749274 (-) True G1762080
TU2018442 other downstream 119993 64626645 ~ 64633733 (-) True LOC110509409
TU2018436 other downstream 127211 64590607 ~ 64626515 (-) False LOC110509409
TU2018239 other downstream 335674 64417310 ~ 64418052 (-) True G1761826
TU2018157 other downstream 530238 64220922 ~ 64223488 (-) True LOC110517683
TU2018734 other upstream 102009 64856508 ~ 64857185 (-) False G1762162

Expression Profile