Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00051217 |
| length | 904 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 8 |
| gene id | XLOC_026262 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 18740950 ~ 18756076 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | biological_process |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | molecular_function |
| GO:0015929 | hexosaminidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050320-57 | Predicted to enable hexosaminidase activity. Predicted to act upstream of or within carbohydrate metabolic process. Orthologous to human HEXD (hexosaminidase D). |
| ensembl_id | ENSDART00000145277 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00052993 | lncRNA | downstream | 285533 | 18461357 ~ 18464993 (-) | True | XLOC_026257 |
| TCONS_00051208 | lncRNA | downstream | 366081 | 18379514 ~ 18384445 (-) | True | XLOC_026255 |
| TCONS_00051206 | lncRNA | downstream | 376922 | 18342553 ~ 18373604 (-) | True | XLOC_026254 |
| TCONS_00052455 | lncRNA | downstream | 572089 | 18177198 ~ 18178437 (-) | False | XLOC_026252 |
| TCONS_00052453 | lncRNA | downstream | 609892 | 18133385 ~ 18140634 (-) | False | XLOC_026252 |
| TCONS_00051223 | lncRNA | upstream | 216757 | 18972408 ~ 18974640 (-) | True | XLOC_026265 |
| TCONS_00051229 | lncRNA | upstream | 431672 | 19187323 ~ 19193940 (-) | True | XLOC_026267 |
| TCONS_00051230 | lncRNA | upstream | 451583 | 19207234 ~ 19216723 (-) | True | XLOC_026268 |
| TCONS_00051237 | lncRNA | upstream | 804331 | 19559982 ~ 19561039 (-) | True | XLOC_026273 |
| TCONS_00051238 | lncRNA | upstream | 1057597 | 19813248 ~ 19814819 (-) | False | XLOC_026274 |
| TCONS_00051215 | mRNA | downstream | 6015 | 18740950 ~ 18744511 (-) | False | XLOC_026262 |
| TCONS_00051214 | mRNA | downstream | 13400 | 18714143 ~ 18737126 (-) | True | XLOC_026261 |
| TCONS_00051212 | mRNA | downstream | 39238 | 18675716 ~ 18711288 (-) | False | XLOC_026260 |
| TCONS_00051213 | mRNA | downstream | 40517 | 18675731 ~ 18710009 (-) | True | XLOC_026260 |
| TCONS_00051211 | mRNA | downstream | 74838 | 18655673 ~ 18675688 (-) | True | XLOC_026259 |
| TCONS_00051218 | mRNA | upstream | 18860 | 18774511 ~ 18792492 (-) | False | XLOC_026263 |
| TCONS_00051219 | mRNA | upstream | 18860 | 18774511 ~ 18792534 (-) | True | XLOC_026263 |
| TCONS_00051221 | mRNA | upstream | 44756 | 18800407 ~ 18805294 (-) | False | XLOC_026264 |
| TCONS_00051222 | mRNA | upstream | 45353 | 18801004 ~ 18805225 (-) | True | XLOC_026264 |
| TCONS_00051224 | mRNA | upstream | 249536 | 19005187 ~ 19133003 (-) | False | XLOC_026266 |
| TCONS_00051202 | other | downstream | 458321 | 18202949 ~ 18292205 (-) | True | XLOC_026252 |
| TCONS_00051201 | other | downstream | 459165 | 18187330 ~ 18291361 (-) | False | XLOC_026252 |
| TCONS_00051199 | other | downstream | 594502 | 18152487 ~ 18156024 (-) | False | XLOC_026252 |
| TCONS_00051167 | other | downstream | 2640668 | 16080660 ~ 16109858 (-) | True | XLOC_026234 |
| TCONS_00051152 | other | downstream | 3043759 | 15697131 ~ 15706767 (-) | True | XLOC_026225 |
| TCONS_00051220 | other | upstream | 42780 | 18798431 ~ 18805221 (-) | False | XLOC_026264 |
| TCONS_00051231 | other | upstream | 577853 | 19333504 ~ 19333631 (-) | True | XLOC_026269 |
| TCONS_00051249 | other | upstream | 1348408 | 20104059 ~ 20106233 (-) | True | XLOC_026281 |
| TCONS_00051254 | other | upstream | 1965189 | 20720840 ~ 20793656 (-) | True | XLOC_026284 |
| TCONS_00051258 | other | upstream | 2216368 | 20972019 ~ 20982706 (-) | True | XLOC_026287 |
