Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00051335 |
| length | 851 |
| lncRNA type | antisense |
| GC content | 0.50 |
| exon number | 5 |
| gene id | XLOC_026322 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 23663144 ~ 24050854 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0034470 | ncRNA processing | biological_process |
| GO:0006396 | RNA processing | biological_process |
| GO:0006400 | tRNA modification | biological_process |
| GO:1901836 | regulation of transcription of nucleolar large rRNA by RNA polymerase I | biological_process |
| GO:0042790 | nucleolar large rRNA transcription by RNA polymerase I | biological_process |
| GO:0008033 | tRNA processing | biological_process |
| GO:0034660 | ncRNA metabolic process | biological_process |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0044444 | obsolete cytoplasmic part | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| id | description |
|---|---|
| ko03230 | Viral genome structure |
| ko05164 | Influenza A |
| ko05169 | Epstein-Barr virus infection |
| ko05016 | Huntington disease |
| ko03200 | Viral proteins |
| ensembl_id | ENSDART00000155072 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00053016 | lncRNA | downstream | 3295 | 23740351 ~ 23744279 (-) | False | XLOC_026324 |
| TCONS_00051334 | lncRNA | downstream | 6909 | 23740362 ~ 23740665 (-) | True | XLOC_026324 |
| TCONS_00053011 | lncRNA | downstream | 37000 | 23701286 ~ 23710574 (-) | False | XLOC_026322 |
| TCONS_00053010 | lncRNA | downstream | 43856 | 23701286 ~ 23703718 (-) | False | XLOC_026322 |
| TCONS_00053009 | lncRNA | downstream | 59287 | 23686198 ~ 23688287 (-) | True | XLOC_026323 |
| TCONS_00051338 | lncRNA | upstream | 73941 | 23934882 ~ 24050083 (-) | True | XLOC_026322 |
| TCONS_00051360 | lncRNA | upstream | 1271079 | 25132020 ~ 25135109 (-) | True | XLOC_026339 |
| TCONS_00051366 | lncRNA | upstream | 1409778 | 25270719 ~ 25273434 (-) | False | XLOC_026342 |
| TCONS_00051380 | lncRNA | upstream | 1821943 | 25682884 ~ 25699598 (-) | False | XLOC_026348 |
| TCONS_00051379 | lncRNA | upstream | 1821943 | 25682884 ~ 25701218 (-) | False | XLOC_026348 |
| TCONS_00051330 | mRNA | downstream | 103744 | 23641938 ~ 23643830 (-) | True | XLOC_026321 |
| TCONS_00051329 | mRNA | downstream | 103823 | 23641935 ~ 23643751 (-) | False | XLOC_026321 |
| TCONS_00051328 | mRNA | downstream | 143178 | 23599290 ~ 23604396 (-) | True | XLOC_026320 |
| TCONS_00051326 | mRNA | downstream | 150765 | 23584663 ~ 23596809 (-) | False | XLOC_026319 |
| TCONS_00051325 | mRNA | downstream | 151042 | 23581614 ~ 23596532 (-) | False | XLOC_026319 |
| TCONS_00051339 | mRNA | upstream | 211779 | 24072720 ~ 24093144 (-) | True | XLOC_026326 |
| TCONS_00051340 | mRNA | upstream | 341015 | 24201956 ~ 24205339 (-) | True | XLOC_026327 |
| TCONS_00051341 | mRNA | upstream | 453756 | 24314697 ~ 24338163 (-) | False | XLOC_026328 |
| TCONS_00051342 | mRNA | upstream | 457202 | 24318143 ~ 24337814 (-) | True | XLOC_026328 |
| TCONS_00051344 | mRNA | upstream | 576422 | 24437363 ~ 24456538 (-) | False | XLOC_026330 |
| TCONS_00051315 | other | downstream | 312573 | 23430245 ~ 23435001 (-) | True | XLOC_026315 |
| TCONS_00051313 | other | downstream | 364966 | 23382492 ~ 23382608 (-) | True | XLOC_026314 |
| TCONS_00051290 | other | downstream | 1570446 | 22161451 ~ 22177128 (-) | False | XLOC_026304 |
| TCONS_00051287 | other | downstream | 2130534 | 21616920 ~ 21617040 (-) | True | XLOC_026301 |
| TCONS_00051260 | other | downstream | 2749214 | 20994504 ~ 20998360 (-) | True | XLOC_026288 |
| TCONS_00051343 | other | upstream | 542208 | 24403149 ~ 24403269 (-) | True | XLOC_026329 |
| TCONS_00051348 | other | upstream | 884825 | 24745766 ~ 24745881 (-) | True | XLOC_026332 |
| TCONS_00051354 | other | upstream | 1218508 | 25079449 ~ 25086951 (-) | True | XLOC_026336 |
| TCONS_00051368 | other | upstream | 1413201 | 25274142 ~ 25275351 (-) | True | XLOC_026342 |
| TCONS_00051408 | other | upstream | 2802107 | 26663048 ~ 26663165 (-) | True | XLOC_026371 |
