RNA id: NM_001124399.1


Basic Information

Item Value
RNA id NM_001124399.1
length 892
RNA type mRNA
GC content 0.51
exon number 2
gene id il17d
representative True

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 27647730 ~ 27648708 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

AAATTCTCTCTTTGCAGTAAAAGTTTACAATTTCGTGTCCAACAGAAGTGCGCAACGATGTTTGGTCGAGTATCTTTCGTGTGTTTGCTTCTGGTGCTGTTATGCGATGTGGCATCGGTAGCCAAGGTGTCCAAGAAGTCCACCCGGGGCCGAAAGTGTTTGGACTTACCGGAAGAAATCCTCGAGCAGATGTTTGGGCGGCTTTCGGTGGGCGTCCTGAGTGCGTTCCACCACACTCTGCAGCTTGCACCATTGGAGCGGAAGAATCTCACCTGCCCATCAGGCGGACGCCCTGTCCCCGACAGGAAGTCTCGGATTCCCGTCAACCTTCTCAGCCTGTCTCCCTGGGCATACAGGATCTCCCACGACCCCGCCAGGTATCCCAGGTTCATACCCGAGGCATATTGCTTGTGTAAAGGCTGTCTGATAGGACCGTTTGGTCAGGAGAGCGACCAGTACCGCAGCACCCCCGTGTACATGCCCTCCGTCATCCTGCGACGCACAGGTTCCTGCGTTGGGGGGCGCCACTCATACACAGAGAGCTACGTATCTGTGGCCGTGGGGTGCACCTGTGTTCCCCTGCTGGAGAAGGATAGGGATGCGCAGAGCAGCAACCAGAGcctggagagagaacagacaaaaGCTGACGAGCTCAGCTCCAACGACAAGAACATATAAAACATCCATGGAAAGCTGTATGAAAATGTATGGTTGGCTGTACAACACAACACCGTGTACCTAGCAGCAGCAGCTTTTGAACAGTAGTATAACTCTCGACACACACTGCCACCTGCTGGTGAATGGAATTATATTTCATGATCATCTAAGCATGTTTCCAGGCTCTCataagtttgtattttctgtgtgtgtatattaaaTATTATTTACACTG

Function

GO:

id name namespace
GO:0006954 inflammatory response biological_process
GO:0005576 extracellular region cellular_component
GO:0005125 cytokine activity molecular_function

KEGG:

id description
K05492 IL17D, IL27; interleukin 17D

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2055065 lncRNA downstream 2703 27644823 ~ 27645027 (-) True G1795689
TU2055031 lncRNA downstream 37330 27610003 ~ 27610400 (-) True G1795660
TU2055003 lncRNA downstream 70777 27573559 ~ 27576953 (-) True G1795632
TU2054968 lncRNA downstream 127832 27519665 ~ 27519898 (-) True G1795603
TU2054958 lncRNA downstream 130192 27501691 ~ 27517538 (-) True LOC110501672
TU2055079 lncRNA upstream 26428 27675136 ~ 27675378 (-) True G1795703
TU2055083 lncRNA upstream 33467 27682175 ~ 27682438 (-) True G1795707
TU2055084 lncRNA upstream 34372 27683080 ~ 27688572 (-) True G1795708
TU2055105 lncRNA upstream 185714 27834422 ~ 27838560 (-) True acbp
TU2055147 lncRNA upstream 215935 27864643 ~ 27865088 (-) True G1795771
XM_021579399.2 mRNA downstream 103148 27539464 ~ 27544582 (-) True LOC110501675
XM_021579395.2 mRNA downstream 130101 27501691 ~ 27517629 (-) False LOC110501672
XR_005038805.1 mRNA downstream 130268 27501691 ~ 27517462 (-) False LOC110501672
XM_021579394.2 mRNA downstream 130269 27501691 ~ 27517461 (-) False LOC110501672
XM_021579392.2 mRNA downstream 149105 27492474 ~ 27498625 (-) True LOC110501670
LOC110502081 mRNA upstream 526 27649234 ~ 27662614 (-) True LOC110502081
XM_036959032.1 mRNA upstream 58223 27706931 ~ 27738671 (-) False LOC110502082
XM_036959029.1 mRNA upstream 58223 27706931 ~ 27739829 (-) False LOC110502082
XM_036959030.1 mRNA upstream 58223 27706931 ~ 27740630 (-) True LOC110502082
XM_021579416.2 mRNA upstream 92667 27741375 ~ 27744078 (-) False LOC110501685
TU2054267 other downstream 361635 27268662 ~ 27286095 (-) True G1794978
TU2052534 other downstream 1936111 25710573 ~ 25711619 (-) True LOC110501627
TU2051516 other downstream 2661462 24985959 ~ 24986268 (-) True G1792433
TU2051424 other downstream 2789845 24856824 ~ 24857885 (-) True G1792345
TU2051421 other downstream 2797978 24848591 ~ 24849752 (-) True G1792342
TU2055049 other upstream 92664 27741372 ~ 27743599 (-) False LOC110501685
TU2055050 other upstream 92664 27741372 ~ 27743599 (-) True LOC110501685
TU2055231 other upstream 331956 27980664 ~ 27981379 (-) True G1795850
TU2055220 other upstream 360947 28009655 ~ 28012690 (-) True LOC110501691
TU2055631 other upstream 685516 28334224 ~ 28334621 (-) True G1796204

Expression Profile