RNA id: trnan-guu-200



Basic Information


Item Value
RNA id trnan-guu-200
length 74
RNA type mRNA
GC content 0.57
exon number 1
gene id trnan-guu-200
representative False

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28720059 ~ 28720298 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTCTCTGTGGCGCAATCGgctagcgcgttagactgttaatctaaaggttggtggttcgagcccacccagggacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2055930 lncRNA downstream 13279 28706557 ~ 28706780 (-) True G1796489
TU2055922 lncRNA downstream 17302 28701932 ~ 28702757 (-) True G1796481
TU2055892 lncRNA downstream 54045 28665761 ~ 28666014 (-) True G1796451
TU2055876 lncRNA downstream 62580 28657258 ~ 28657479 (-) True G1796435
TU2055872 lncRNA downstream 64517 28655216 ~ 28655542 (-) True G1796431
TU2055957 lncRNA upstream 13576 28733708 ~ 28733948 (-) True G1796516
TU2055987 lncRNA upstream 35010 28755142 ~ 28755391 (-) True G1796546
TU2056164 lncRNA upstream 35876 28756008 ~ 28756257 (-) True G1796687
TU2056179 lncRNA upstream 72260 28792392 ~ 28792604 (-) True G1796695
TU2056183 lncRNA upstream 75978 28796110 ~ 28796315 (-) True G1796699
XM_036959044.1 mRNA downstream 171494 28538705 ~ 28548565 (-) False LOC110501696
XM_036959045.1 mRNA downstream 171494 28538705 ~ 28548565 (-) True LOC110501696
XM_036959043.1 mRNA downstream 177104 28538705 ~ 28542955 (-) False LOC110501696
LOC110502083 mRNA downstream 657376 28058893 ~ 28062683 (-) True LOC110502083
XM_021579427.2 mRNA downstream 700943 28009421 ~ 28019116 (-) False LOC110501691
XR_005038812.1 mRNA upstream 99198 28819330 ~ 28826708 (-) False LOC110501699
XR_005038814.1 mRNA upstream 604013 29324145 ~ 29325269 (-) True LOC118943585
XM_021579450.2 mRNA upstream 713420 29433552 ~ 29441063 (-) False LOC110501708
XM_021579449.2 mRNA upstream 713420 29433552 ~ 29441071 (-) False LOC110501708
XM_021579452.2 mRNA upstream 885931 29606063 ~ 29619908 (-) True dnajc15
TU2055842 other downstream 93168 28626138 ~ 28626891 (-) True G1796401
TU2055669 other downstream 281288 28434915 ~ 28438771 (-) False G1796239
TU2055631 other downstream 385438 28334224 ~ 28334621 (-) True G1796204
TU2055220 other downstream 707369 28009655 ~ 28012690 (-) True LOC110501691
TU2055231 other downstream 738680 27980664 ~ 27981379 (-) True G1795850
TU2056199 other upstream 106155 28826287 ~ 28826645 (-) True LOC110501699
TU2056693 other upstream 491532 29211664 ~ 29243649 (-) False G1797146
TU2056696 other upstream 491532 29211664 ~ 29243649 (-) True G1797146
TU2057122 other upstream 939335 29659467 ~ 29660947 (-) True G1797556
TU2057451 other upstream 1118145 29838277 ~ 29843180 (-) True LOC110501714