Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036959402.1 |
| length | 2296 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | LOC110501922 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 44647142 ~ 44658569 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0050896 | response to stimulus | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K09041 | NFE2N, CNC; nuclear factor erythroid 2, invertebrate |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2074917 | lncRNA | upstream | 112365 | 44541015 ~ 44541680 (+) | True | G1813695 |
| TU2074900 | lncRNA | upstream | 133456 | 44520062 ~ 44520589 (+) | True | G1813679 |
| TU2074889 | lncRNA | upstream | 143670 | 44509411 ~ 44510375 (+) | True | G1813669 |
| TU2074882 | lncRNA | upstream | 157469 | 44495892 ~ 44496576 (+) | True | G1813664 |
| TU2074870 | lncRNA | upstream | 169142 | 44484434 ~ 44484903 (+) | True | G1813654 |
| TU2074979 | lncRNA | downstream | 1519 | 44660088 ~ 44660498 (+) | True | G1813749 |
| TU2074982 | lncRNA | downstream | 17378 | 44675947 ~ 44676167 (+) | True | G1813752 |
| TU2074984 | lncRNA | downstream | 20966 | 44679535 ~ 44679832 (+) | True | G1813754 |
| TU2074989 | lncRNA | downstream | 30759 | 44689328 ~ 44689591 (+) | True | G1813759 |
| TU2075838 | lncRNA | downstream | 52545 | 44711114 ~ 44711318 (+) | True | G1814493 |
| XM_021579792.2 | mRNA | upstream | 80127 | 44566863 ~ 44573918 (+) | False | LOC110501918 |
| XM_021579789.2 | mRNA | upstream | 181177 | 44468192 ~ 44472868 (+) | True | LOC110501916 |
| XM_021579790.2 | mRNA | upstream | 183835 | 44468192 ~ 44470210 (+) | False | LOC110501916 |
| XM_036959389.1 | mRNA | upstream | 191028 | 44452312 ~ 44463017 (+) | False | LOC110502170 |
| XM_021580002.2 | mRNA | downstream | 325342 | 44983911 ~ 44987844 (+) | True | LOC110502137 |
| XM_036959408.1 | mRNA | downstream | 351178 | 45009747 ~ 45022170 (+) | False | LOC110501931 |
| XM_036959409.1 | mRNA | downstream | 351178 | 45009747 ~ 45022170 (+) | False | LOC110501931 |
| XM_021579820.2 | mRNA | downstream | 514322 | 45172891 ~ 45175477 (+) | False | LOC110501942 |
| XM_021579822.2 | mRNA | downstream | 514424 | 45172993 ~ 45175477 (+) | False | LOC110501942 |
| TU2074893 | other | upstream | 80124 | 44566888 ~ 44573921 (+) | True | LOC110501918 |
| TU2074885 | other | upstream | 145994 | 44498457 ~ 44508051 (+) | True | G1813665 |
| TU2074792 | other | upstream | 282122 | 44362661 ~ 44371923 (+) | True | G1813588 |
| TU2074675 | other | upstream | 333934 | 44318158 ~ 44320111 (+) | True | LOC110502169 |
| TU2074609 | other | upstream | 543178 | 44109320 ~ 44110867 (+) | True | G1813442 |
| TU2076178 | other | downstream | 451978 | 45110547 ~ 45111229 (+) | True | G1814811 |
| TU2076159 | other | downstream | 514406 | 45172975 ~ 45175472 (+) | True | LOC110501942 |
| TU2076385 | other | downstream | 863351 | 45521920 ~ 45527440 (+) | True | LOC110502177 |
| TU2076542 | other | downstream | 1066578 | 45725147 ~ 45726328 (+) | True | G1815113 |
| TU2076572 | other | downstream | 1122930 | 45781499 ~ 45782536 (+) | True | G1815137 |
