Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004903 |
| length | 1125 |
| RNA type | processed_transcript |
| GC content | 0.42 |
| exon number | 3 |
| gene id | XLOC_002636 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 11593998 ~ 11764439 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0030198 | extracellular matrix organization | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0031012 | extracellular matrix | cellular_component |
| GO:0004222 | metalloendopeptidase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008237 | metallopeptidase activity | molecular_function |
| id | description |
|---|---|
| ko01002 | Peptidases and inhibitors |
| ensembl_id | ENSDART00000133879 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004895 | lncRNA | downstream | 428267 | 11331969 ~ 11333113 (-) | False | XLOC_002632 |
| TCONS_00006010 | lncRNA | downstream | 973731 | 10784334 ~ 10787649 (-) | True | XLOC_002626 |
| TCONS_00006009 | lncRNA | downstream | 1047153 | 10712178 ~ 10714227 (-) | True | XLOC_002625 |
| TCONS_00004883 | lncRNA | downstream | 1047159 | 10712178 ~ 10714221 (-) | False | XLOC_002625 |
| TCONS_00004881 | lncRNA | downstream | 1182548 | 10564261 ~ 10578832 (-) | False | XLOC_002624 |
| TCONS_00006011 | lncRNA | upstream | 130934 | 11895373 ~ 11898575 (-) | True | XLOC_002638 |
| TCONS_00006012 | lncRNA | upstream | 1534400 | 13298839 ~ 13301973 (-) | True | XLOC_002642 |
| TCONS_00006013 | lncRNA | upstream | 3266567 | 15031006 ~ 15042748 (-) | True | XLOC_002656 |
| TCONS_00006014 | lncRNA | upstream | 3268533 | 15032972 ~ 15034960 (-) | True | XLOC_002657 |
| TCONS_00004942 | lncRNA | upstream | 3317971 | 15082410 ~ 15084047 (-) | False | XLOC_002660 |
| TCONS_00004901 | mRNA | downstream | 363790 | 11394528 ~ 11397590 (-) | True | XLOC_002635 |
| TCONS_00004899 | mRNA | downstream | 376225 | 11382365 ~ 11385155 (-) | False | XLOC_002634 |
| TCONS_00004900 | mRNA | downstream | 377480 | 11382797 ~ 11383900 (-) | True | XLOC_002634 |
| TCONS_00004897 | mRNA | downstream | 384889 | 11371961 ~ 11376491 (-) | False | XLOC_002633 |
| TCONS_00004898 | mRNA | downstream | 385370 | 11372428 ~ 11376010 (-) | True | XLOC_002633 |
| TCONS_00004904 | mRNA | upstream | 26442 | 11790881 ~ 11840353 (-) | True | XLOC_002637 |
| TCONS_00004905 | mRNA | upstream | 883991 | 12648430 ~ 12650259 (-) | False | XLOC_002639 |
| TCONS_00004906 | mRNA | upstream | 884221 | 12648660 ~ 12652512 (-) | True | XLOC_002639 |
| TCONS_00004907 | mRNA | upstream | 1315653 | 13080092 ~ 13179077 (-) | False | XLOC_002640 |
| TCONS_00004908 | mRNA | upstream | 1320535 | 13084974 ~ 13178853 (-) | False | XLOC_002640 |
| TCONS_00004879 | other | downstream | 1428953 | 10319308 ~ 10332427 (-) | False | XLOC_002623 |
| TCONS_00004880 | other | downstream | 1431826 | 10329464 ~ 10329554 (-) | True | XLOC_002623 |
| TCONS_00004869 | other | downstream | 2223054 | 9534782 ~ 9538326 (-) | False | XLOC_002618 |
| TCONS_00004859 | other | downstream | 2619701 | 9141565 ~ 9141679 (-) | True | XLOC_002611 |
| TCONS_00004856 | other | downstream | 2671744 | 9037358 ~ 9089636 (-) | False | XLOC_002608 |
| TCONS_00004913 | other | upstream | 1540626 | 13305065 ~ 13305183 (-) | True | XLOC_002643 |
| TCONS_00004918 | other | upstream | 1842588 | 13607027 ~ 13607143 (-) | True | XLOC_002646 |
| TCONS_00004919 | other | upstream | 1847694 | 13612133 ~ 13612248 (-) | True | XLOC_002647 |
| TCONS_00004920 | other | upstream | 2167130 | 13931569 ~ 13931696 (-) | True | XLOC_002648 |
| TCONS_00004922 | other | upstream | 2562387 | 14326826 ~ 14488154 (-) | False | XLOC_002649 |
