RNA id: TCONS_00004905


Basic Information

Item Value
RNA id TCONS_00004905
length 1065
RNA type mRNA
GC content 0.47
exon number 7
gene id XLOC_002639
representative False

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 12648430 ~ 12652512 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGCTAGAACAGCTCAGTCGAAGAGAGAATGTGATTGTTGGAGGAGATATGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGATTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTACAGTTAGTCCAGaGTAATGAGGTGGGTGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTTGACCTGTTGGATGCCCGCGGTGTTCGTCTGGAATGCATCATCACAGACAGACATCCTCAAATACAGAAATATCTCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTCCAAAAAACTGGACAAGATATGCCAGATAAAGGGGTGTGAGAAGTTGCGTAAATGGTTACGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACAAGACAAACATGTACATGAAGACCCCAATTTTCCGGCTTGTCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATTCTACAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACGTCAACTGTTGAAGCTTTCCACAGCGTCATACTGCGGTTTGCACCCAAAAATGTGGTATTCCCATTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTTCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATTTACAAGCTTGCCTTTCCAAAGGCAAAGAAAGGAGAGTATAGGGTCCGAGAAGTGAAGACACAGCAAACTTTCgGTTATGTAGAAGAGCTGCTGGACCTCATCTTCAACCAAGTGTTTGTGGACCCATCACCCTATGTTGATGAAGTGTTGGGAATTCACATACCACCTGCTCTATCATCAGCCTACGATCGACCTGAGATGGAGGAGGCTATCTCCAGCAGGGTGACCCGCTTCAATCAATAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000191567

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006011 lncRNA downstream 749855 11895373 ~ 11898575 (-) True XLOC_002638
TCONS_00004895 lncRNA downstream 1315317 11331969 ~ 11333113 (-) False XLOC_002632
TCONS_00006010 lncRNA downstream 1860781 10784334 ~ 10787649 (-) True XLOC_002626
TCONS_00006009 lncRNA downstream 1934203 10712178 ~ 10714227 (-) True XLOC_002625
TCONS_00004883 lncRNA downstream 1934209 10712178 ~ 10714221 (-) False XLOC_002625
TCONS_00006012 lncRNA upstream 648580 13298839 ~ 13301973 (-) True XLOC_002642
TCONS_00006013 lncRNA upstream 2380747 15031006 ~ 15042748 (-) True XLOC_002656
TCONS_00006014 lncRNA upstream 2382713 15032972 ~ 15034960 (-) True XLOC_002657
TCONS_00004942 lncRNA upstream 2432151 15082410 ~ 15084047 (-) False XLOC_002660
TCONS_00004943 lncRNA upstream 2432151 15082410 ~ 15086297 (-) False XLOC_002660
TCONS_00004904 mRNA downstream 808077 11790881 ~ 11840353 (-) True XLOC_002637
TCONS_00004902 mRNA downstream 886503 11593998 ~ 11761927 (-) False XLOC_002636
TCONS_00004901 mRNA downstream 1250840 11394528 ~ 11397590 (-) True XLOC_002635
TCONS_00004899 mRNA downstream 1263275 11382365 ~ 11385155 (-) False XLOC_002634
TCONS_00004900 mRNA downstream 1264530 11382797 ~ 11383900 (-) True XLOC_002634
TCONS_00004907 mRNA upstream 429833 13080092 ~ 13179077 (-) False XLOC_002640
TCONS_00004908 mRNA upstream 434715 13084974 ~ 13178853 (-) False XLOC_002640
TCONS_00004909 mRNA upstream 439897 13090156 ~ 13116337 (-) False XLOC_002640
TCONS_00004910 mRNA upstream 439897 13090156 ~ 13178920 (-) False XLOC_002640
TCONS_00004911 mRNA upstream 490902 13141161 ~ 13178986 (-) True XLOC_002640
TCONS_00004903 other downstream 883991 11761380 ~ 11764439 (-) True XLOC_002636
TCONS_00004879 other downstream 2316003 10319308 ~ 10332427 (-) False XLOC_002623
TCONS_00004880 other downstream 2318876 10329464 ~ 10329554 (-) True XLOC_002623
TCONS_00004869 other downstream 3110104 9534782 ~ 9538326 (-) False XLOC_002618
TCONS_00004859 other downstream 3506751 9141565 ~ 9141679 (-) True XLOC_002611
TCONS_00004913 other upstream 654806 13305065 ~ 13305183 (-) True XLOC_002643
TCONS_00004918 other upstream 956768 13607027 ~ 13607143 (-) True XLOC_002646
TCONS_00004919 other upstream 961874 13612133 ~ 13612248 (-) True XLOC_002647
TCONS_00004920 other upstream 1281310 13931569 ~ 13931696 (-) True XLOC_002648
TCONS_00004922 other upstream 1676567 14326826 ~ 14488154 (-) False XLOC_002649

Expression Profile

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