Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2040300 |
| length | 287 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G1781988 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 16386905 ~ 16387191 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2040290 | lncRNA | downstream | 6232 | 16380372 ~ 16380673 (-) | True | G1781978 |
| TU2040129 | lncRNA | downstream | 104371 | 16282298 ~ 16282534 (-) | True | G1781826 |
| TU2040122 | lncRNA | downstream | 111573 | 16275056 ~ 16275332 (-) | True | G1781819 |
| TU2040120 | lncRNA | downstream | 113384 | 16273284 ~ 16273521 (-) | True | G1781817 |
| TU2040118 | lncRNA | downstream | 113724 | 16272944 ~ 16273181 (-) | True | G1781815 |
| TU2040318 | lncRNA | upstream | 9271 | 16396462 ~ 16396803 (-) | True | G1782006 |
| TU2040336 | lncRNA | upstream | 21179 | 16408370 ~ 16408779 (-) | True | G1782024 |
| TU2040973 | lncRNA | upstream | 91011 | 16478202 ~ 16479678 (-) | True | G1782599 |
| TU2040979 | lncRNA | upstream | 101723 | 16488914 ~ 16490890 (-) | True | G1782604 |
| TU2040980 | lncRNA | upstream | 105196 | 16492387 ~ 16494412 (-) | True | G1782605 |
| XM_021579092.2 | mRNA | downstream | 298291 | 16045523 ~ 16088614 (-) | True | LOC110501493 |
| XM_036958863.1 | mRNA | downstream | 309875 | 16045523 ~ 16077030 (-) | False | LOC110501493 |
| XM_036958862.1 | mRNA | downstream | 365838 | 16002547 ~ 16021067 (-) | True | ttc21b |
| XM_021579091.2 | mRNA | downstream | 366255 | 16002547 ~ 16020650 (-) | False | ttc21b |
| XM_036958861.1 | mRNA | downstream | 386433 | 15990139 ~ 16000472 (-) | True | galnt3 |
| XM_021579108.2 | mRNA | upstream | 154064 | 16541255 ~ 16578678 (-) | False | LOC110501500 |
| XM_021579105.2 | mRNA | upstream | 154064 | 16541255 ~ 16578680 (-) | False | LOC110501500 |
| XM_021579107.2 | mRNA | upstream | 154064 | 16541255 ~ 16578681 (-) | False | LOC110501500 |
| XM_021579112.2 | mRNA | upstream | 154064 | 16541255 ~ 16578681 (-) | False | LOC110501500 |
| XM_021579109.2 | mRNA | upstream | 154064 | 16541255 ~ 16578732 (-) | False | LOC110501500 |
| TU2039451 | other | downstream | 561691 | 15685856 ~ 15825214 (-) | True | b3galt1b |
| TU2039382 | other | downstream | 818371 | 15567503 ~ 15568534 (-) | False | G1781137 |
| TU2036210 | other | downstream | 3056410 | 13279280 ~ 13330495 (-) | True | G1778224 |
| TU2036124 | other | downstream | 3213926 | 13168780 ~ 13172979 (-) | False | G1778140 |
| TU2041294 | other | upstream | 669931 | 17057122 ~ 17063448 (-) | False | LOC110501514 |
| TU2041295 | other | upstream | 669931 | 17057122 ~ 17063385 (-) | True | LOC110501514 |
| TU2042341 | other | upstream | 1482338 | 17869529 ~ 17903951 (-) | False | G1783895 |
| TU2042338 | other | upstream | 1482937 | 17870128 ~ 17903951 (-) | True | G1783895 |
| TU2044261 | other | upstream | 2788376 | 19175567 ~ 19177740 (-) | False | LOC110501547 |
