Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2044997 |
| length | 680 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1786379 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 19686490 ~ 19687169 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2044431 | lncRNA | downstream | 195757 | 19490519 ~ 19490733 (-) | True | G1785861 |
| TU2044427 | lncRNA | downstream | 200155 | 19486128 ~ 19486335 (-) | True | G1785857 |
| TU2044317 | lncRNA | downstream | 366651 | 19319492 ~ 19319839 (-) | True | G1785752 |
| TU2044313 | lncRNA | downstream | 394902 | 19291367 ~ 19291588 (-) | True | G1785748 |
| TU2044310 | lncRNA | downstream | 402111 | 19284031 ~ 19284379 (-) | True | G1785745 |
| TU2044998 | lncRNA | upstream | 596 | 19687765 ~ 19688406 (-) | True | G1786380 |
| TU2045193 | lncRNA | upstream | 287151 | 19974320 ~ 19974561 (-) | True | G1786566 |
| TU2045206 | lncRNA | upstream | 301699 | 19988868 ~ 19989288 (-) | True | G1786579 |
| TU2045273 | lncRNA | upstream | 395217 | 20082386 ~ 20082662 (-) | True | G1786646 |
| TU2045283 | lncRNA | upstream | 403512 | 20090681 ~ 20091112 (-) | True | G1786654 |
| XM_021579233.2 | mRNA | downstream | 20289 | 19655763 ~ 19666201 (-) | False | znf142 |
| XM_036958937.1 | mRNA | downstream | 20289 | 19655763 ~ 19666201 (-) | False | znf142 |
| XM_036958934.1 | mRNA | downstream | 82932 | 19572445 ~ 19603558 (-) | True | LOC110501567 |
| XM_036958933.1 | mRNA | downstream | 115860 | 19544358 ~ 19570630 (-) | True | LOC110501564 |
| XM_021579226.2 | mRNA | downstream | 115940 | 19544358 ~ 19570550 (-) | False | LOC110501564 |
| XM_021579240.2 | mRNA | upstream | 56551 | 19743720 ~ 19761865 (-) | False | vil1 |
| XM_021579239.2 | mRNA | upstream | 56551 | 19743720 ~ 19763860 (-) | True | vil1 |
| XM_036958942.1 | mRNA | upstream | 82239 | 19769408 ~ 19787506 (-) | False | LOC110501577 |
| XM_036958940.1 | mRNA | upstream | 82239 | 19769408 ~ 19787524 (-) | False | LOC110501577 |
| XM_036958941.1 | mRNA | upstream | 82239 | 19769408 ~ 19787525 (-) | True | LOC110501577 |
| TU2044972 | other | downstream | 27390 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 364631 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2044262 | other | downstream | 507306 | 19175567 ~ 19179184 (-) | True | LOC110501547 |
| TU2044261 | other | downstream | 508750 | 19175567 ~ 19177740 (-) | False | LOC110501547 |
| TU2042341 | other | downstream | 1782539 | 17869529 ~ 17903951 (-) | False | G1783895 |
| TU2045476 | other | upstream | 658530 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2045833 | other | upstream | 703347 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2047639 | other | upstream | 2103587 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2048419 | other | upstream | 2730961 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 3477312 | 23164481 ~ 23169363 (-) | True | G1790280 |
