Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2045273 |
| length | 241 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G1786646 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20082386 ~ 20082662 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2045206 | lncRNA | downstream | 93098 | 19988868 ~ 19989288 (-) | True | G1786579 |
| TU2045193 | lncRNA | downstream | 107825 | 19974320 ~ 19974561 (-) | True | G1786566 |
| TU2044998 | lncRNA | downstream | 393980 | 19687765 ~ 19688406 (-) | True | G1786380 |
| TU2044997 | lncRNA | downstream | 395217 | 19686490 ~ 19687169 (-) | True | G1786379 |
| TU2044431 | lncRNA | downstream | 591653 | 19490519 ~ 19490733 (-) | True | G1785861 |
| TU2045283 | lncRNA | upstream | 8019 | 20090681 ~ 20091112 (-) | True | G1786654 |
| TU2045341 | lncRNA | upstream | 72801 | 20155463 ~ 20183323 (-) | True | G1786709 |
| TU2045354 | lncRNA | upstream | 89177 | 20171839 ~ 20175644 (-) | True | G1786720 |
| TU2045367 | lncRNA | upstream | 107860 | 20190522 ~ 20190787 (-) | True | G1786733 |
| TU2045371 | lncRNA | upstream | 110380 | 20193042 ~ 20193459 (-) | True | G1786737 |
| XR_005038965.1 | mRNA | downstream | 292463 | 19788794 ~ 19789923 (-) | True | LOC118943631 |
| XM_036958941.1 | mRNA | downstream | 294861 | 19769408 ~ 19787525 (-) | True | LOC110501577 |
| XM_036958940.1 | mRNA | downstream | 294862 | 19769408 ~ 19787524 (-) | False | LOC110501577 |
| XM_036958942.1 | mRNA | downstream | 294880 | 19769408 ~ 19787506 (-) | False | LOC110501577 |
| XM_021579239.2 | mRNA | downstream | 318526 | 19743720 ~ 19763860 (-) | True | vil1 |
| XM_021579249.2 | mRNA | upstream | 113050 | 20195712 ~ 20202996 (-) | False | agr1 |
| XM_021579248.2 | mRNA | upstream | 113050 | 20195712 ~ 20203864 (-) | True | agr1 |
| XM_036958953.1 | mRNA | upstream | 296803 | 20379465 ~ 20502301 (-) | False | hdac4 |
| XM_036958949.1 | mRNA | upstream | 296803 | 20379465 ~ 20551605 (-) | False | hdac4 |
| XM_036958950.1 | mRNA | upstream | 296803 | 20379465 ~ 20551605 (-) | False | hdac4 |
| TU2044972 | other | downstream | 423286 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 760527 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2044262 | other | downstream | 903202 | 19175567 ~ 19179184 (-) | True | LOC110501547 |
| TU2044261 | other | downstream | 904646 | 19175567 ~ 19177740 (-) | False | LOC110501547 |
| TU2042338 | other | downstream | 2178435 | 17870128 ~ 17903951 (-) | True | G1783895 |
| TU2045476 | other | upstream | 263037 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2045833 | other | upstream | 307854 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2047639 | other | upstream | 1708094 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2048419 | other | upstream | 2335468 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 3081819 | 23164481 ~ 23169363 (-) | True | G1790280 |
