Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2045367 |
| length | 266 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G1786733 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20190522 ~ 20190787 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2045341 | lncRNA | downstream | 7199 | 20155463 ~ 20183323 (-) | True | G1786709 |
| TU2045354 | lncRNA | downstream | 14878 | 20171839 ~ 20175644 (-) | True | G1786720 |
| TU2045283 | lncRNA | downstream | 99410 | 20090681 ~ 20091112 (-) | True | G1786654 |
| TU2045273 | lncRNA | downstream | 107860 | 20082386 ~ 20082662 (-) | True | G1786646 |
| TU2045206 | lncRNA | downstream | 201234 | 19988868 ~ 19989288 (-) | True | G1786579 |
| TU2045371 | lncRNA | upstream | 2255 | 20193042 ~ 20193459 (-) | True | G1786737 |
| TU2045388 | lncRNA | upstream | 29419 | 20220206 ~ 20220908 (-) | False | G1786751 |
| TU2045387 | lncRNA | upstream | 29758 | 20220545 ~ 20221073 (-) | True | G1786751 |
| TU2045414 | lncRNA | upstream | 73860 | 20264647 ~ 20265233 (-) | True | G1786777 |
| TU2045418 | lncRNA | upstream | 76775 | 20267562 ~ 20267764 (-) | True | G1786781 |
| XR_005038965.1 | mRNA | downstream | 400599 | 19788794 ~ 19789923 (-) | True | LOC118943631 |
| XM_036958941.1 | mRNA | downstream | 402997 | 19769408 ~ 19787525 (-) | True | LOC110501577 |
| XM_036958940.1 | mRNA | downstream | 402998 | 19769408 ~ 19787524 (-) | False | LOC110501577 |
| XM_036958942.1 | mRNA | downstream | 403016 | 19769408 ~ 19787506 (-) | False | LOC110501577 |
| XM_021579239.2 | mRNA | downstream | 426662 | 19743720 ~ 19763860 (-) | True | vil1 |
| XM_021579249.2 | mRNA | upstream | 4925 | 20195712 ~ 20202996 (-) | False | agr1 |
| XM_021579248.2 | mRNA | upstream | 4925 | 20195712 ~ 20203864 (-) | True | agr1 |
| XM_036958953.1 | mRNA | upstream | 188678 | 20379465 ~ 20502301 (-) | False | hdac4 |
| XM_036958949.1 | mRNA | upstream | 188678 | 20379465 ~ 20551605 (-) | False | hdac4 |
| XM_036958950.1 | mRNA | upstream | 188678 | 20379465 ~ 20551605 (-) | False | hdac4 |
| TU2044972 | other | downstream | 531422 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 868663 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2044262 | other | downstream | 1011338 | 19175567 ~ 19179184 (-) | True | LOC110501547 |
| TU2044261 | other | downstream | 1012782 | 19175567 ~ 19177740 (-) | False | LOC110501547 |
| TU2042338 | other | downstream | 2286571 | 17870128 ~ 17903951 (-) | True | G1783895 |
| TU2045476 | other | upstream | 154912 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2045833 | other | upstream | 199729 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2047639 | other | upstream | 1599969 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2048419 | other | upstream | 2227343 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 2973694 | 23164481 ~ 23169363 (-) | True | G1790280 |
