Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2045387 |
| length | 435 |
| lncRNA type | antisense_over |
| GC content | 0.57 |
| exon number | 2 |
| gene id | G1786751 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20220206 ~ 20221073 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2045371 | lncRNA | downstream | 27086 | 20193042 ~ 20193459 (-) | True | G1786737 |
| TU2045367 | lncRNA | downstream | 29758 | 20190522 ~ 20190787 (-) | True | G1786733 |
| TU2045341 | lncRNA | downstream | 37222 | 20155463 ~ 20183323 (-) | True | G1786709 |
| TU2045354 | lncRNA | downstream | 44901 | 20171839 ~ 20175644 (-) | True | G1786720 |
| TU2045283 | lncRNA | downstream | 129433 | 20090681 ~ 20091112 (-) | True | G1786654 |
| TU2045414 | lncRNA | upstream | 43574 | 20264647 ~ 20265233 (-) | True | G1786777 |
| TU2045418 | lncRNA | upstream | 46489 | 20267562 ~ 20267764 (-) | True | G1786781 |
| TU2045427 | lncRNA | upstream | 60086 | 20281159 ~ 20281745 (-) | False | G1786788 |
| TU2045428 | lncRNA | upstream | 60086 | 20281159 ~ 20281832 (-) | True | G1786788 |
| TU2045429 | lncRNA | upstream | 62040 | 20283113 ~ 20283322 (-) | True | G1786789 |
| XM_021579248.2 | mRNA | downstream | 16681 | 20195712 ~ 20203864 (-) | True | agr1 |
| XM_021579249.2 | mRNA | downstream | 17549 | 20195712 ~ 20202996 (-) | False | agr1 |
| XR_005038965.1 | mRNA | downstream | 430622 | 19788794 ~ 19789923 (-) | True | LOC118943631 |
| XM_036958941.1 | mRNA | downstream | 433020 | 19769408 ~ 19787525 (-) | True | LOC110501577 |
| XM_036958940.1 | mRNA | downstream | 433021 | 19769408 ~ 19787524 (-) | False | LOC110501577 |
| XM_036958953.1 | mRNA | upstream | 158392 | 20379465 ~ 20502301 (-) | False | hdac4 |
| XM_036958949.1 | mRNA | upstream | 158392 | 20379465 ~ 20551605 (-) | False | hdac4 |
| XM_036958950.1 | mRNA | upstream | 158392 | 20379465 ~ 20551605 (-) | False | hdac4 |
| XM_036958951.1 | mRNA | upstream | 158392 | 20379465 ~ 20660978 (-) | False | hdac4 |
| XM_036958952.1 | mRNA | upstream | 158392 | 20379465 ~ 20660978 (-) | True | hdac4 |
| TU2044972 | other | downstream | 561445 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 898686 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2044262 | other | downstream | 1041361 | 19175567 ~ 19179184 (-) | True | LOC110501547 |
| TU2044261 | other | downstream | 1042805 | 19175567 ~ 19177740 (-) | False | LOC110501547 |
| TU2042338 | other | downstream | 2316594 | 17870128 ~ 17903951 (-) | True | G1783895 |
| TU2045476 | other | upstream | 124626 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2045833 | other | upstream | 169443 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2047639 | other | upstream | 1569683 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2048419 | other | upstream | 2197057 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 2943408 | 23164481 ~ 23169363 (-) | True | G1790280 |
