RNA id: TCONS_00051537


Basic Information

Item Value
RNA id TCONS_00051537
length 698
RNA type mRNA
GC content 0.57
exon number 12
gene id XLOC_026445
representative True

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 30998362 ~ 31019832 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgtctgcctgtctgccaAGATGCTGGCCCGTGCACTCCTGCAGACCTCTCTGGTCCTGTGGCTGGTACAGAGCACCATACAGGGAGGAGTTAGGCCACAGACTGGAGCTCTTGGAAGATTGGCAAGTCGAGGGCCTGGCATTGGTGCAAAAACTGGAGTGGCTGGAATTCTCGGAGCTCGTGGCTATGGAGCAGGCAAGGCAGGGAAAACAAGCGCGGGCCGTTACATTGGAGGAGCAGCATACAGACCCACTGCCGTCAGAGGAGGCCTGAAACAAGGATATGGGACGCTGGGTTACGGAGGGGCTGCAAACCTTGGTGCTGGCCTTGGCGCTGGTCTTGGGACAGGACTTGGGACTGGTCTTGGGCCAGCTGGACTTGGACTGGGAGCAGCGTATGGTTTAGGCAATGGGCTGGGAGCAGCTCTGGGTTATCCCGGAGGAAAACTTGGAGCTAGAGGTTACACTGGTAATGGCTATGGAGCTCAGCTAGGTTATGGTGCTGGTGGATACCCTGGCGTTGGACGCGGGTATGGGCTTGGTGCTGCCGGATATCTTGGAACTGGGTATACTGATGGTTATGGAGCAGGTCTCGGGGCCGGCTTATATCCACAAGGAGTTCGAGCAGGAAAGCAGATCGCAGGCTACAGTAATGGATACGGCAGTGAGGTTTATGGCACAGCAGACGCTTATGGAGCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000156687

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00053050 lncRNA downstream 302194 30694877 ~ 30696290 (-) True XLOC_026439
TCONS_00051527 lncRNA downstream 322456 30670505 ~ 30676028 (-) True XLOC_026438
TCONS_00051515 lncRNA downstream 750225 30247749 ~ 30248259 (-) True XLOC_026434
TCONS_00053049 lncRNA downstream 796653 30199036 ~ 30201831 (-) True XLOC_026432
TCONS_00053048 lncRNA downstream 959335 30036697 ~ 30039149 (-) True XLOC_026427
TCONS_00053051 lncRNA upstream 22237 31041952 ~ 31058290 (-) True XLOC_026446
TCONS_00051546 lncRNA upstream 60965 31080680 ~ 31082367 (-) False XLOC_026449
TCONS_00053052 lncRNA upstream 73497 31093212 ~ 31093764 (-) True XLOC_026450
TCONS_00051549 lncRNA upstream 85653 31105368 ~ 31108643 (-) False XLOC_026451
TCONS_00053053 lncRNA upstream 154418 31174133 ~ 31177209 (-) True XLOC_026453
TCONS_00051534 mRNA downstream 35838 30947964 ~ 30962646 (-) True XLOC_026444
TCONS_00051533 mRNA downstream 57122 30926364 ~ 30941362 (-) True XLOC_026443
TCONS_00051532 mRNA downstream 88997 30888126 ~ 30909487 (-) True XLOC_026442
TCONS_00051531 mRNA downstream 110069 30873085 ~ 30888415 (-) False XLOC_026442
TCONS_00051530 mRNA downstream 113234 30868326 ~ 30885250 (-) False XLOC_026442
TCONS_00051538 mRNA upstream 22870 31042585 ~ 31057624 (-) True XLOC_026447
TCONS_00051539 mRNA upstream 43491 31063206 ~ 31068468 (-) False XLOC_026448
TCONS_00051540 mRNA upstream 43559 31063274 ~ 31069776 (-) False XLOC_026448
TCONS_00051541 mRNA upstream 44089 31063804 ~ 31068425 (-) False XLOC_026448
TCONS_00051542 mRNA upstream 44202 31063917 ~ 31068468 (-) False XLOC_026448
TCONS_00051529 other downstream 197826 30800541 ~ 30800658 (-) True XLOC_026441
TCONS_00051520 other downstream 510390 30454353 ~ 30488094 (-) False XLOC_026436
TCONS_00051482 other downstream 1128360 29868899 ~ 29870124 (-) True XLOC_026416
TCONS_00051481 other downstream 1129752 29868635 ~ 29868732 (-) True XLOC_026418
TCONS_00051479 other downstream 1130944 29867404 ~ 29867540 (-) True XLOC_026417
TCONS_00051585 other upstream 1166419 32186134 ~ 32187385 (-) False XLOC_026474
TCONS_00051635 other upstream 1953259 32972974 ~ 32973534 (-) True XLOC_026495
TCONS_00051656 other upstream 2404477 33424192 ~ 33424328 (-) True XLOC_026505
TCONS_00051678 other upstream 2928954 33948669 ~ 33948788 (-) True XLOC_026513
TCONS_00051702 other upstream 3003450 34023165 ~ 34023613 (-) True XLOC_026529

Expression Profile

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