Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2045455 |
| length | 292 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1786814 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20324200 ~ 20324491 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2045444 | lncRNA | downstream | 21617 | 20302162 ~ 20302583 (-) | True | G1786804 |
| TU2045433 | lncRNA | downstream | 36653 | 20287193 ~ 20287547 (-) | True | G1786793 |
| TU2045432 | lncRNA | downstream | 37131 | 20286866 ~ 20287069 (-) | True | G1786792 |
| TU2045430 | lncRNA | downstream | 39360 | 20284595 ~ 20284840 (-) | True | G1786790 |
| TU2045429 | lncRNA | downstream | 40878 | 20283113 ~ 20283322 (-) | True | G1786789 |
| TU2045456 | lncRNA | upstream | 221 | 20324712 ~ 20324935 (-) | True | G1786815 |
| TU2045478 | lncRNA | upstream | 21655 | 20346146 ~ 20346632 (-) | True | G1786834 |
| TU2045490 | lncRNA | upstream | 29256 | 20353747 ~ 20354077 (-) | True | G1786846 |
| TU2045880 | lncRNA | upstream | 74361 | 20398852 ~ 20400113 (-) | True | G1787208 |
| TU2045931 | lncRNA | upstream | 200282 | 20524773 ~ 20532999 (-) | True | G1787259 |
| XM_021579248.2 | mRNA | downstream | 120336 | 20195712 ~ 20203864 (-) | True | agr1 |
| XM_021579249.2 | mRNA | downstream | 121204 | 20195712 ~ 20202996 (-) | False | agr1 |
| XR_005038965.1 | mRNA | downstream | 534277 | 19788794 ~ 19789923 (-) | True | LOC118943631 |
| XM_036958941.1 | mRNA | downstream | 536675 | 19769408 ~ 19787525 (-) | True | LOC110501577 |
| XM_036958940.1 | mRNA | downstream | 536676 | 19769408 ~ 19787524 (-) | False | LOC110501577 |
| XM_036958953.1 | mRNA | upstream | 54974 | 20379465 ~ 20502301 (-) | False | hdac4 |
| XM_036958949.1 | mRNA | upstream | 54974 | 20379465 ~ 20551605 (-) | False | hdac4 |
| XM_036958950.1 | mRNA | upstream | 54974 | 20379465 ~ 20551605 (-) | False | hdac4 |
| XM_036958951.1 | mRNA | upstream | 54974 | 20379465 ~ 20660978 (-) | False | hdac4 |
| XM_036958952.1 | mRNA | upstream | 54974 | 20379465 ~ 20660978 (-) | True | hdac4 |
| TU2044972 | other | downstream | 665100 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 1002341 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2044262 | other | downstream | 1145016 | 19175567 ~ 19179184 (-) | True | LOC110501547 |
| TU2044261 | other | downstream | 1146460 | 19175567 ~ 19177740 (-) | False | LOC110501547 |
| TU2042338 | other | downstream | 2420249 | 17870128 ~ 17903951 (-) | True | G1783895 |
| TU2045476 | other | upstream | 21208 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2045833 | other | upstream | 66025 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2047639 | other | upstream | 1466265 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2048419 | other | upstream | 2093639 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 2839990 | 23164481 ~ 23169363 (-) | True | G1790280 |
