Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2045490 |
| length | 331 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1786846 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20353747 ~ 20354077 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2045478 | lncRNA | downstream | 7115 | 20346146 ~ 20346632 (-) | True | G1786834 |
| TU2045456 | lncRNA | downstream | 28812 | 20324712 ~ 20324935 (-) | True | G1786815 |
| TU2045455 | lncRNA | downstream | 29256 | 20324200 ~ 20324491 (-) | True | G1786814 |
| TU2045444 | lncRNA | downstream | 51164 | 20302162 ~ 20302583 (-) | True | G1786804 |
| TU2045433 | lncRNA | downstream | 66200 | 20287193 ~ 20287547 (-) | True | G1786793 |
| TU2045880 | lncRNA | upstream | 44775 | 20398852 ~ 20400113 (-) | True | G1787208 |
| TU2045931 | lncRNA | upstream | 170696 | 20524773 ~ 20532999 (-) | True | G1787259 |
| TU2046704 | lncRNA | upstream | 744236 | 21098313 ~ 21122358 (-) | True | G1787982 |
| TU2046732 | lncRNA | upstream | 782466 | 21136543 ~ 21136749 (-) | True | G1788010 |
| TU2046736 | lncRNA | upstream | 784252 | 21138329 ~ 21139127 (-) | True | G1788013 |
| XM_021579248.2 | mRNA | downstream | 149883 | 20195712 ~ 20203864 (-) | True | agr1 |
| XM_021579249.2 | mRNA | downstream | 150751 | 20195712 ~ 20202996 (-) | False | agr1 |
| XR_005038965.1 | mRNA | downstream | 563824 | 19788794 ~ 19789923 (-) | True | LOC118943631 |
| XM_036958941.1 | mRNA | downstream | 566222 | 19769408 ~ 19787525 (-) | True | LOC110501577 |
| XM_036958940.1 | mRNA | downstream | 566223 | 19769408 ~ 19787524 (-) | False | LOC110501577 |
| XM_036958953.1 | mRNA | upstream | 25388 | 20379465 ~ 20502301 (-) | False | hdac4 |
| XM_036958949.1 | mRNA | upstream | 25388 | 20379465 ~ 20551605 (-) | False | hdac4 |
| XM_036958950.1 | mRNA | upstream | 25388 | 20379465 ~ 20551605 (-) | False | hdac4 |
| XM_036958951.1 | mRNA | upstream | 25388 | 20379465 ~ 20660978 (-) | False | hdac4 |
| XM_036958952.1 | mRNA | upstream | 25388 | 20379465 ~ 20660978 (-) | True | hdac4 |
| TU2045476 | other | downstream | 7733 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2044972 | other | downstream | 694647 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 1031888 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2044262 | other | downstream | 1174563 | 19175567 ~ 19179184 (-) | True | LOC110501547 |
| TU2044261 | other | downstream | 1176007 | 19175567 ~ 19177740 (-) | False | LOC110501547 |
| TU2045833 | other | upstream | 36439 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2047639 | other | upstream | 1436679 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2048419 | other | upstream | 2064053 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 2810404 | 23164481 ~ 23169363 (-) | True | G1790280 |
| TU2049906 | other | upstream | 3078917 | 23432994 ~ 23460360 (-) | True | LOC110501997 |
