Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2045791 |
| length | 1180 |
| lncRNA type | antisense_over |
| GC content | 0.51 |
| exon number | 5 |
| gene id | G1787128 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20765912 ~ 20773791 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2045783 | lncRNA | upstream | 8231 | 20755572 ~ 20757681 (+) | True | G1787121 |
| TU2045776 | lncRNA | upstream | 18999 | 20746514 ~ 20746913 (+) | True | G1787114 |
| TU2045737 | lncRNA | upstream | 82384 | 20683313 ~ 20683528 (+) | True | G1787081 |
| TU2045731 | lncRNA | upstream | 88378 | 20677331 ~ 20677534 (+) | True | G1787075 |
| TU2045510 | lncRNA | upstream | 364550 | 20399200 ~ 20401362 (+) | True | G1786866 |
| TU2046173 | lncRNA | downstream | 198924 | 20968446 ~ 20988849 (+) | False | G1787486 |
| TU2046178 | lncRNA | downstream | 198924 | 20968446 ~ 20988849 (+) | False | G1787486 |
| TU2046174 | lncRNA | downstream | 199223 | 20968745 ~ 20988849 (+) | True | G1787486 |
| TU2046310 | lncRNA | downstream | 229244 | 20998766 ~ 20999045 (+) | True | G1787608 |
| TU2046320 | lncRNA | downstream | 236682 | 21006204 ~ 21006445 (+) | True | G1787618 |
| XM_021579254.2 | mRNA | upstream | 400380 | 20359640 ~ 20365532 (+) | True | twist2 |
| XM_021579956.2 | mRNA | upstream | 421956 | 20338128 ~ 20343956 (+) | True | LOC110502064 |
| XM_036958948.1 | mRNA | upstream | 484060 | 20269646 ~ 20281852 (+) | False | asb1 |
| XM_036958947.1 | mRNA | upstream | 489046 | 20269646 ~ 20276866 (+) | False | asb1 |
| XM_021579252.2 | mRNA | upstream | 514431 | 20206403 ~ 20251481 (+) | True | traf3ip1 |
| LOC110502066 | mRNA | downstream | 174402 | 20943924 ~ 20945171 (+) | True | LOC110502066 |
| XM_021579264.2 | mRNA | downstream | 859022 | 21628544 ~ 21642681 (+) | False | LOC110501589 |
| XM_021579262.2 | mRNA | downstream | 859029 | 21628551 ~ 21667403 (+) | False | LOC110501589 |
| XM_036958956.1 | mRNA | downstream | 859031 | 21628553 ~ 21667403 (+) | False | LOC110501589 |
| XM_036958957.1 | mRNA | downstream | 859031 | 21628553 ~ 21667403 (+) | False | LOC110501589 |
| TU2044940 | other | upstream | 481341 | 20283181 ~ 20284571 (+) | True | G1786330 |
| TU2044933 | other | upstream | 484058 | 20281013 ~ 20281854 (+) | False | asb1 |
| TU2044524 | other | upstream | 1103986 | 19661109 ~ 19661926 (+) | True | G1785947 |
| TU2044159 | other | upstream | 1138152 | 19616995 ~ 19627760 (+) | True | LOC110501568 |
| TU2044113 | other | upstream | 1193473 | 19570580 ~ 19572439 (+) | False | ybey |
| TU2046423 | other | downstream | 364743 | 21134265 ~ 21136477 (+) | True | G1787719 |
| TU2047590 | other | downstream | 1225842 | 21995364 ~ 21996093 (+) | True | G1788811 |
| TU2047594 | other | downstream | 1228951 | 21998473 ~ 21999623 (+) | True | G1788815 |
| TU2049337 | other | downstream | 2646571 | 23416093 ~ 23432383 (+) | True | G1790442 |
| TU2049772 | other | downstream | 3349040 | 24118562 ~ 24119475 (+) | True | G1790805 |
