Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2047770 |
| length | 437 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1788980 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21964622 ~ 21965058 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2047753 | lncRNA | downstream | 23075 | 21940742 ~ 21941547 (-) | True | G1788964 |
| TU2047637 | lncRNA | downstream | 66494 | 21897596 ~ 21898128 (-) | True | G1788856 |
| TU2047641 | lncRNA | downstream | 175471 | 21788858 ~ 21789151 (-) | False | LOC110501594 |
| TU2047640 | lncRNA | downstream | 176436 | 21787890 ~ 21788186 (-) | True | G1788859 |
| TU2047635 | lncRNA | downstream | 178997 | 21783215 ~ 21785625 (-) | True | G1788854 |
| TU2047773 | lncRNA | upstream | 1724 | 21966782 ~ 21967087 (-) | True | G1788981 |
| TU2047775 | lncRNA | upstream | 4108 | 21969166 ~ 21969530 (-) | True | hecw2a |
| TU2047780 | lncRNA | upstream | 13328 | 21978386 ~ 21978618 (-) | True | G1788988 |
| TU2047782 | lncRNA | upstream | 16603 | 21981661 ~ 21981879 (-) | True | G1788990 |
| TU2047784 | lncRNA | upstream | 17797 | 21982855 ~ 21983230 (-) | True | G1788992 |
| XM_021579277.2 | mRNA | downstream | 6918 | 21936514 ~ 21957704 (-) | True | stk17b |
| XM_021579275.2 | mRNA | downstream | 6928 | 21936514 ~ 21957694 (-) | False | stk17b |
| XM_021579276.2 | mRNA | downstream | 6928 | 21936514 ~ 21957694 (-) | False | stk17b |
| XM_036958958.1 | mRNA | downstream | 28208 | 21922800 ~ 21936414 (-) | False | ftcdnl1 |
| XM_021579274.2 | mRNA | downstream | 35463 | 21923310 ~ 21929159 (-) | True | ftcdnl1 |
| XM_021579278.2 | mRNA | upstream | 4094 | 21969152 ~ 22021354 (-) | False | hecw2a |
| XM_021579280.2 | mRNA | upstream | 4094 | 21969152 ~ 22021354 (-) | False | hecw2a |
| XR_005038799.1 | mRNA | upstream | 7979 | 21973037 ~ 22021354 (-) | False | hecw2a |
| XM_036958960.1 | mRNA | upstream | 274120 | 22239178 ~ 22636495 (-) | False | LOC110502069 |
| XM_036958961.1 | mRNA | upstream | 274120 | 22239178 ~ 22636505 (-) | False | LOC110502069 |
| TU2047639 | other | downstream | 143677 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2045833 | other | downstream | 1508639 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2045476 | other | downstream | 1618608 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2044972 | other | downstream | 2305522 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 2642763 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2048419 | other | upstream | 453072 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 1199423 | 23164481 ~ 23169363 (-) | True | G1790280 |
| TU2049906 | other | upstream | 1467936 | 23432994 ~ 23460360 (-) | True | LOC110501997 |
| TU2050435 | other | upstream | 2361671 | 24326729 ~ 24327127 (-) | True | G1791405 |
| TU2051421 | other | upstream | 2883533 | 24848591 ~ 24849752 (-) | True | G1792342 |
