Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2047780 |
| length | 233 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1788988 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21978386 ~ 21978618 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2047775 | lncRNA | downstream | 8856 | 21969166 ~ 21969530 (-) | True | hecw2a |
| TU2047773 | lncRNA | downstream | 11299 | 21966782 ~ 21967087 (-) | True | G1788981 |
| TU2047770 | lncRNA | downstream | 13328 | 21964622 ~ 21965058 (-) | True | G1788980 |
| TU2047753 | lncRNA | downstream | 36839 | 21940742 ~ 21941547 (-) | True | G1788964 |
| TU2047637 | lncRNA | downstream | 80258 | 21897596 ~ 21898128 (-) | True | G1788856 |
| TU2047782 | lncRNA | upstream | 3043 | 21981661 ~ 21981879 (-) | True | G1788990 |
| TU2047784 | lncRNA | upstream | 4237 | 21982855 ~ 21983230 (-) | True | G1788992 |
| TU2047785 | lncRNA | upstream | 7860 | 21986478 ~ 21986709 (-) | True | G1788993 |
| TU2047786 | lncRNA | upstream | 8409 | 21987027 ~ 21987240 (-) | True | G1788994 |
| TU2047788 | lncRNA | upstream | 10360 | 21988978 ~ 21989245 (-) | True | G1788996 |
| XM_021579277.2 | mRNA | downstream | 20682 | 21936514 ~ 21957704 (-) | True | stk17b |
| XM_021579275.2 | mRNA | downstream | 20692 | 21936514 ~ 21957694 (-) | False | stk17b |
| XM_021579276.2 | mRNA | downstream | 20692 | 21936514 ~ 21957694 (-) | False | stk17b |
| XM_036958958.1 | mRNA | downstream | 41972 | 21922800 ~ 21936414 (-) | False | ftcdnl1 |
| XM_036958960.1 | mRNA | upstream | 260560 | 22239178 ~ 22636495 (-) | False | LOC110502069 |
| XM_036958961.1 | mRNA | upstream | 260560 | 22239178 ~ 22636505 (-) | False | LOC110502069 |
| XM_036958962.1 | mRNA | upstream | 262127 | 22240745 ~ 22636498 (-) | False | LOC110502069 |
| XM_036958963.1 | mRNA | upstream | 262127 | 22240745 ~ 22636506 (-) | False | LOC110502069 |
| XM_021579286.2 | mRNA | upstream | 1012076 | 22990694 ~ 22996267 (-) | True | LOC110501602 |
| TU2047639 | other | downstream | 157441 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2045833 | other | downstream | 1522403 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2045476 | other | downstream | 1632372 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2044972 | other | downstream | 2319286 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 2656527 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2048419 | other | upstream | 439512 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 1185863 | 23164481 ~ 23169363 (-) | True | G1790280 |
| TU2049906 | other | upstream | 1454376 | 23432994 ~ 23460360 (-) | True | LOC110501997 |
| TU2050435 | other | upstream | 2348111 | 24326729 ~ 24327127 (-) | True | G1791405 |
| TU2051421 | other | upstream | 2869973 | 24848591 ~ 24849752 (-) | True | G1792342 |
