Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2047946 |
| length | 269 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1789146 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 22221556 ~ 22221824 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2047938 | lncRNA | downstream | 4500 | 22216850 ~ 22217056 (-) | True | G1789140 |
| TU2047922 | lncRNA | downstream | 25634 | 22195704 ~ 22195922 (-) | True | G1789124 |
| TU2047911 | lncRNA | downstream | 40553 | 22180719 ~ 22181003 (-) | True | G1789113 |
| TU2047910 | lncRNA | downstream | 41149 | 22179964 ~ 22180407 (-) | True | G1789112 |
| TU2047883 | lncRNA | downstream | 45652 | 22175529 ~ 22175904 (-) | True | G1789085 |
| TU2047959 | lncRNA | upstream | 6379 | 22228203 ~ 22228406 (-) | True | G1789159 |
| TU2047973 | lncRNA | upstream | 12895 | 22234719 ~ 22235760 (-) | True | G1789168 |
| TU2048365 | lncRNA | upstream | 116521 | 22338345 ~ 22339193 (-) | True | G1789528 |
| TU2048412 | lncRNA | upstream | 177212 | 22399036 ~ 22400728 (-) | True | G1789574 |
| TU2048425 | lncRNA | upstream | 208664 | 22430488 ~ 22430688 (-) | True | G1789587 |
| XM_021579278.2 | mRNA | downstream | 200202 | 21969152 ~ 22021354 (-) | False | hecw2a |
| XM_021579280.2 | mRNA | downstream | 200202 | 21969152 ~ 22021354 (-) | False | hecw2a |
| XR_005038799.1 | mRNA | downstream | 200202 | 21973037 ~ 22021354 (-) | False | hecw2a |
| XM_021579277.2 | mRNA | downstream | 263852 | 21936514 ~ 21957704 (-) | True | stk17b |
| XM_021579276.2 | mRNA | downstream | 263862 | 21936514 ~ 21957694 (-) | False | stk17b |
| XM_036958960.1 | mRNA | upstream | 17354 | 22239178 ~ 22636495 (-) | False | LOC110502069 |
| XM_036958961.1 | mRNA | upstream | 17354 | 22239178 ~ 22636505 (-) | False | LOC110502069 |
| XM_036958962.1 | mRNA | upstream | 18921 | 22240745 ~ 22636498 (-) | False | LOC110502069 |
| XM_036958963.1 | mRNA | upstream | 18921 | 22240745 ~ 22636506 (-) | False | LOC110502069 |
| XM_021579286.2 | mRNA | upstream | 768870 | 22990694 ~ 22996267 (-) | True | LOC110501602 |
| TU2047639 | other | downstream | 400611 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2045833 | other | downstream | 1765573 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2045476 | other | downstream | 1875542 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2044972 | other | downstream | 2562456 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2044318 | other | downstream | 2899697 | 19321188 ~ 19321859 (-) | True | G1785753 |
| TU2048419 | other | upstream | 196306 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2049161 | other | upstream | 942657 | 23164481 ~ 23169363 (-) | True | G1790280 |
| TU2049906 | other | upstream | 1211170 | 23432994 ~ 23460360 (-) | True | LOC110501997 |
| TU2050435 | other | upstream | 2104905 | 24326729 ~ 24327127 (-) | True | G1791405 |
| TU2051421 | other | upstream | 2626767 | 24848591 ~ 24849752 (-) | True | G1792342 |
