Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2048629 |
| length | 315 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1789773 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 22765753 ~ 22766067 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2048309 | lncRNA | downstream | 129746 | 22573117 ~ 22636007 (-) | True | LOC110502069 |
| TU2048525 | lncRNA | downstream | 193826 | 22571721 ~ 22571927 (-) | True | G1789676 |
| TU2048520 | lncRNA | downstream | 198952 | 22566230 ~ 22566801 (-) | True | G1789671 |
| TU2048513 | lncRNA | downstream | 206205 | 22559177 ~ 22559548 (-) | True | G1789664 |
| TU2048512 | lncRNA | downstream | 207280 | 22558249 ~ 22558473 (-) | True | G1789663 |
| TU2048647 | lncRNA | upstream | 8971 | 22775038 ~ 22775276 (-) | True | G1789791 |
| TU2048656 | lncRNA | upstream | 16317 | 22782384 ~ 22782598 (-) | True | G1789800 |
| TU2048658 | lncRNA | upstream | 16656 | 22782723 ~ 22783050 (-) | True | G1789802 |
| TU2049092 | lncRNA | upstream | 252554 | 23018621 ~ 23018841 (-) | True | G1790215 |
| TU2049168 | lncRNA | upstream | 424670 | 23190737 ~ 23192377 (-) | True | G1790287 |
| XM_036958963.1 | mRNA | downstream | 129247 | 22240745 ~ 22636506 (-) | False | LOC110502069 |
| XM_036958961.1 | mRNA | downstream | 129248 | 22239178 ~ 22636505 (-) | False | LOC110502069 |
| XM_036958962.1 | mRNA | downstream | 129255 | 22240745 ~ 22636498 (-) | False | LOC110502069 |
| XM_036958960.1 | mRNA | downstream | 129258 | 22239178 ~ 22636495 (-) | False | LOC110502069 |
| XM_021579278.2 | mRNA | downstream | 744399 | 21969152 ~ 22021354 (-) | False | hecw2a |
| XM_021579286.2 | mRNA | upstream | 224627 | 22990694 ~ 22996267 (-) | True | LOC110501602 |
| XM_036959585.1 | mRNA | upstream | 257903 | 23023970 ~ 23042872 (-) | True | LOC118943636 |
| XM_021579287.2 | mRNA | upstream | 290577 | 23056644 ~ 23079505 (-) | False | dcbld2 |
| XM_021579288.2 | mRNA | upstream | 290577 | 23056644 ~ 23079508 (-) | True | dcbld2 |
| XM_036959550.1 | mRNA | upstream | 431699 | 23197766 ~ 23235686 (-) | False | LOC110502006 |
| TU2048419 | other | downstream | 346255 | 22418130 ~ 22419498 (-) | True | G1789581 |
| TU2047639 | other | downstream | 944808 | 21790756 ~ 21820945 (-) | True | LOC110501594 |
| TU2045833 | other | downstream | 2309770 | 20390516 ~ 20455983 (-) | True | G1787166 |
| TU2045476 | other | downstream | 2419739 | 20345699 ~ 20346014 (-) | True | G1786832 |
| TU2044972 | other | downstream | 3106653 | 19656282 ~ 19659100 (-) | True | znf142 |
| TU2049161 | other | upstream | 398414 | 23164481 ~ 23169363 (-) | True | G1790280 |
| TU2049906 | other | upstream | 666927 | 23432994 ~ 23460360 (-) | True | LOC110501997 |
| TU2050435 | other | upstream | 1560662 | 24326729 ~ 24327127 (-) | True | G1791405 |
| TU2051421 | other | upstream | 2082524 | 24848591 ~ 24849752 (-) | True | G1792342 |
| TU2051424 | other | upstream | 2090757 | 24856824 ~ 24857885 (-) | True | G1792345 |
