Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00051554 |
| length | 1065 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | XLOC_026454 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 31201542 ~ 31226841 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| id | description |
|---|---|
| ko04131 | Membrane trafficking |
| id | description |
|---|---|
| ZDB-GENE-090527-1 | Predicted to act upstream of or within exocytosis. Predicted to be located in membrane. Orthologous to human SYT17 (synaptotagmin 17). |
| ensembl_id | ENSDART00000181592 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00053053 | lncRNA | downstream | 33073 | 31174133 ~ 31177209 (-) | True | XLOC_026453 |
| TCONS_00051549 | lncRNA | downstream | 101639 | 31105368 ~ 31108643 (-) | False | XLOC_026451 |
| TCONS_00053052 | lncRNA | downstream | 116518 | 31093212 ~ 31093764 (-) | True | XLOC_026450 |
| TCONS_00051546 | lncRNA | downstream | 127915 | 31080680 ~ 31082367 (-) | False | XLOC_026449 |
| TCONS_00053051 | lncRNA | downstream | 151992 | 31041952 ~ 31058290 (-) | True | XLOC_026446 |
| TCONS_00052472 | lncRNA | upstream | 293244 | 31511470 ~ 31600282 (-) | False | XLOC_026457 |
| TCONS_00052473 | lncRNA | upstream | 293548 | 31511774 ~ 31600282 (-) | False | XLOC_026457 |
| TCONS_00052474 | lncRNA | upstream | 298464 | 31516690 ~ 31517317 (-) | True | XLOC_026457 |
| TCONS_00053054 | lncRNA | upstream | 432027 | 31650253 ~ 31650711 (-) | True | XLOC_026460 |
| TCONS_00053055 | lncRNA | upstream | 658622 | 31876848 ~ 32055378 (-) | True | XLOC_026466 |
| TCONS_00051551 | mRNA | downstream | 51845 | 31118026 ~ 31158437 (-) | False | XLOC_026452 |
| TCONS_00051552 | mRNA | downstream | 51900 | 31118030 ~ 31158382 (-) | True | XLOC_026452 |
| TCONS_00051548 | mRNA | downstream | 94286 | 31104891 ~ 31115996 (-) | False | XLOC_026451 |
| TCONS_00051550 | mRNA | downstream | 94681 | 31107467 ~ 31115601 (-) | True | XLOC_026451 |
| TCONS_00051547 | mRNA | downstream | 123512 | 31080700 ~ 31086770 (-) | True | XLOC_026449 |
| TCONS_00051556 | mRNA | upstream | 31659 | 31249885 ~ 31254379 (-) | False | XLOC_026455 |
| TCONS_00051557 | mRNA | upstream | 31840 | 31250066 ~ 31254979 (-) | True | XLOC_026455 |
| TCONS_00051558 | mRNA | upstream | 38946 | 31257172 ~ 31258459 (-) | True | XLOC_026456 |
| TCONS_00051559 | mRNA | upstream | 388555 | 31606781 ~ 31618037 (-) | False | XLOC_026458 |
| TCONS_00051560 | mRNA | upstream | 388860 | 31607086 ~ 31619463 (-) | True | XLOC_026458 |
| TCONS_00051529 | other | downstream | 409624 | 30800541 ~ 30800658 (-) | True | XLOC_026441 |
| TCONS_00051520 | other | downstream | 722188 | 30454353 ~ 30488094 (-) | False | XLOC_026436 |
| TCONS_00051482 | other | downstream | 1340158 | 29868899 ~ 29870124 (-) | True | XLOC_026416 |
| TCONS_00051481 | other | downstream | 1341550 | 29868635 ~ 29868732 (-) | True | XLOC_026418 |
| TCONS_00051479 | other | downstream | 1342742 | 29867404 ~ 29867540 (-) | True | XLOC_026417 |
| TCONS_00051585 | other | upstream | 967908 | 32186134 ~ 32187385 (-) | False | XLOC_026474 |
| TCONS_00051635 | other | upstream | 1754748 | 32972974 ~ 32973534 (-) | True | XLOC_026495 |
| TCONS_00051656 | other | upstream | 2205966 | 33424192 ~ 33424328 (-) | True | XLOC_026505 |
| TCONS_00051678 | other | upstream | 2730443 | 33948669 ~ 33948788 (-) | True | XLOC_026513 |
| TCONS_00051702 | other | upstream | 2804939 | 34023165 ~ 34023613 (-) | True | XLOC_026529 |
