RNA id: TU2051516



Basic Information


Item Value
RNA id TU2051516
length 310
RNA type TUCP
GC content 0.61
exon number 1
gene id G1792433
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 24985959 ~ 24986268 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GCCTCCGCCGGCTCGTCAgactctcatgcctcagccggatcgccaggctcccctgcctcagctggTCTGTCAGGTTACCGCGTCCCAGCTGGCGACAGGTTCCCGCACATCAGCAGGGGTGACCGGTCCTCTCCTGACCCCGGGGATCGTCCCTTGGGTTGGCGTCCTACGGCTGGAGCTGAACGCGCCGGGGAAGGGTACCATCATGTATGCTCTCTCCGGCACTTTAGGTCTGCTCCATGCGAAATTAGCATACCACCTGAGTCCCTTCACTGTTTCACACCaagtagtttggtggatgggactacca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2051512 lncRNA downstream 8752 24976701 ~ 24977207 (-) True G1792429
TU2051511 lncRNA downstream 9297 24976223 ~ 24976662 (-) True G1792428
TU2051505 lncRNA downstream 14665 24971061 ~ 24971294 (-) True G1792422
TU2051502 lncRNA downstream 16169 24969579 ~ 24969790 (-) True G1792419
TU2051501 lncRNA downstream 16937 24968645 ~ 24969022 (-) True G1792418
TU2051529 lncRNA upstream 17455 25003723 ~ 25003947 (-) True G1792446
TU2051531 lncRNA upstream 25332 25011600 ~ 25013698 (-) True G1792448
TU2051547 lncRNA upstream 49059 25035327 ~ 25035791 (-) True G1792462
TU2051601 lncRNA upstream 106000 25092268 ~ 25093244 (-) False G1792509
TU2051602 lncRNA upstream 106000 25092268 ~ 25094151 (-) True G1792509
XM_021579292.2 mRNA downstream 200957 24779405 ~ 24785002 (-) True LOC110501608
NM_001124564.1 mRNA downstream 207024 24774718 ~ 24778935 (-) True tnfsf13b
XM_036958970.1 mRNA downstream 230109 24519574 ~ 24755850 (-) False LOC110502073
XM_021579294.2 mRNA upstream 113173 25099441 ~ 25149856 (-) False LOC110501610
XM_036959587.1 mRNA upstream 176921 25163189 ~ 25176805 (-) False LOC110501612
XR_005038964.1 mRNA upstream 244993 25231261 ~ 25234195 (-) True LOC118943630
XM_021579307.2 mRNA upstream 287600 25273868 ~ 25278632 (-) True LOC110501615
XM_021579308.2 mRNA upstream 315551 25301819 ~ 25311767 (-) False LOC110501616
TU2051424 other downstream 128074 24856824 ~ 24857885 (-) True G1792345
TU2051421 other downstream 136207 24848591 ~ 24849752 (-) True G1792342
TU2050435 other downstream 658832 24326729 ~ 24327127 (-) True G1791405
TU2049906 other downstream 1525599 23432994 ~ 23460360 (-) True LOC110501997
TU2049161 other downstream 1816596 23164481 ~ 23169363 (-) True G1790280
TU2052534 other upstream 724305 25710573 ~ 25711619 (-) True LOC110501627
TU2054267 other upstream 2282394 27268662 ~ 27286095 (-) True G1794978
TU2055049 other upstream 2755104 27741372 ~ 27743599 (-) False LOC110501685
TU2055050 other upstream 2755104 27741372 ~ 27743599 (-) True LOC110501685
TU2055231 other upstream 2994396 27980664 ~ 27981379 (-) True G1795850

Expression Profile