RNA id: TU2055631



Basic Information


Item Value
RNA id TU2055631
length 326
RNA type TUCP
GC content 0.58
exon number 2
gene id G1796204
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28334224 ~ 28334621 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggtacattgacaccctcaaccggcagagagtcattgtgtcctctgcatctagaaaacatgtccaccagcttggtacaacacaagcagaacctgagaccagcatggcctccactacacagccggatgacactgcaccagcctaccagtctgctccagcccaggtcaacctaccagcctctcagtctgctccagcccaggtcaacctaccagcctcccagtctgctccagcccaggtcagaataccagcctcccagtctgctccagcccaggtcaacctaccagcctcccagtctgctccagcccaggtcagaataccagcctcccag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2055601 lncRNA downstream 85776 28248127 ~ 28248448 (-) True G1796176
TU2055596 lncRNA downstream 97713 28236191 ~ 28236511 (-) True G1796171
TU2055593 lncRNA downstream 101129 28232885 ~ 28233095 (-) True G1796168
TU2055590 lncRNA downstream 105819 28228155 ~ 28228405 (-) True G1796165
TU2055581 lncRNA downstream 115766 28218255 ~ 28218458 (-) True G1796156
TU2055653 lncRNA upstream 60215 28394836 ~ 28400271 (-) True G1796224
TU2055672 lncRNA upstream 115455 28450076 ~ 28451815 (-) True G1796239
TU2055704 lncRNA upstream 176673 28511294 ~ 28511757 (-) True G1796264
TU2055737 lncRNA upstream 202458 28537079 ~ 28537504 (-) True G1796297
TU2055743 lncRNA upstream 217244 28551865 ~ 28552108 (-) True G1796302
LOC110502083 mRNA downstream 271541 28058893 ~ 28062683 (-) True LOC110502083
XM_021579427.2 mRNA downstream 315108 28009421 ~ 28019116 (-) False LOC110501691
XM_036959037.1 mRNA downstream 315441 28009421 ~ 28018783 (-) False LOC110501691
XM_036959035.1 mRNA downstream 421305 27903582 ~ 27912919 (-) True LOC110501689
XM_036959036.1 mRNA downstream 421307 27903582 ~ 27912917 (-) False LOC110501689
XM_036959043.1 mRNA upstream 204084 28538705 ~ 28542955 (-) False LOC110501696
XM_036959044.1 mRNA upstream 204084 28538705 ~ 28548565 (-) False LOC110501696
XM_036959045.1 mRNA upstream 204084 28538705 ~ 28548565 (-) True LOC110501696
trnan-guu-200 mRNA upstream 385438 28720059 ~ 28720132 (-) False trnan-guu-200
XR_005038812.1 mRNA upstream 484709 28819330 ~ 28826708 (-) False LOC110501699
TU2055220 other downstream 321534 28009655 ~ 28012690 (-) True LOC110501691
TU2055231 other downstream 352845 27980664 ~ 27981379 (-) True G1795850
TU2055049 other downstream 590625 27741372 ~ 27743599 (-) False LOC110501685
TU2055050 other downstream 590625 27741372 ~ 27743599 (-) True LOC110501685
TU2054267 other downstream 1048129 27268662 ~ 27286095 (-) True G1794978
TU2055669 other upstream 100294 28434915 ~ 28438771 (-) False G1796239
TU2055842 other upstream 291517 28626138 ~ 28626891 (-) True G1796401
TU2056199 other upstream 491666 28826287 ~ 28826645 (-) True LOC110501699
TU2056693 other upstream 877043 29211664 ~ 29243649 (-) False G1797146
TU2056696 other upstream 877043 29211664 ~ 29243649 (-) True G1797146

Expression Profile