RNA id: TU2055669



Basic Information


Item Value
RNA id TU2055669
length 751
RNA type TUCP
GC content 0.47
exon number 2
gene id G1796239
representative False

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28434915 ~ 28451815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agagttgaactgggatgtagacatggggctatggttgaggctatggttgaggctagggttagagttgaactgggatgtagacatgaggctatggttgaggctatggttagagttgaactgggatgtaaacatgaggctatggttgaggctatggttgagcctagggttagagttgaactgggatgtagacatggggctatggttgaggctaggtttGAGaatatggttgaggctatggttgaggctatggttgaggctagggttagagttgaactgggatgtaaacatgaggctatggttgaggctatggttgaggctagggttagggttgaactgggatgtaaacatgaggctatggttgaggctatggttgagtcTAGGGTTGAGGCTAtgtttgaggctagggttaggggttaggattgaactgggatgtagacatggggctatggttgaggctagggttagggttgaactaggatgtagacatgaggctatggttgaggctagggttaggattgaactgggatatggacttgaagctagggttgagactagggttagagttgaactgggatgtaaacatgatgctatggttgaggttatggttgagactagggttagagttgaactgggatgtagacatggggctatggttgaggctatggttgaggctagggttagagttgaactgggatgtagacatgaggctatggttgaggctatggttagagttgaactgggatgtagacat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2055653 lncRNA downstream 34644 28394836 ~ 28400271 (-) True G1796224
TU2055601 lncRNA downstream 186467 28248127 ~ 28248448 (-) True G1796176
TU2055596 lncRNA downstream 198404 28236191 ~ 28236511 (-) True G1796171
TU2055593 lncRNA downstream 201820 28232885 ~ 28233095 (-) True G1796168
TU2055590 lncRNA downstream 206510 28228155 ~ 28228405 (-) True G1796165
TU2055672 lncRNA upstream 11305 28450076 ~ 28451815 (-) True G1796239
TU2055704 lncRNA upstream 72523 28511294 ~ 28511757 (-) True G1796264
TU2055737 lncRNA upstream 98308 28537079 ~ 28537504 (-) True G1796297
TU2055743 lncRNA upstream 113094 28551865 ~ 28552108 (-) True G1796302
TU2055769 lncRNA upstream 126554 28565325 ~ 28584782 (-) True G1796328
LOC110502083 mRNA downstream 372232 28058893 ~ 28062683 (-) True LOC110502083
XM_021579427.2 mRNA downstream 415799 28009421 ~ 28019116 (-) False LOC110501691
XM_036959037.1 mRNA downstream 416132 28009421 ~ 28018783 (-) False LOC110501691
XM_036959035.1 mRNA downstream 521996 27903582 ~ 27912919 (-) True LOC110501689
XM_036959036.1 mRNA downstream 521998 27903582 ~ 27912917 (-) False LOC110501689
XM_036959043.1 mRNA upstream 99934 28538705 ~ 28542955 (-) False LOC110501696
XM_036959044.1 mRNA upstream 99934 28538705 ~ 28548565 (-) False LOC110501696
XM_036959045.1 mRNA upstream 99934 28538705 ~ 28548565 (-) True LOC110501696
trnan-guu-200 mRNA upstream 281288 28720059 ~ 28720132 (-) False trnan-guu-200
XR_005038812.1 mRNA upstream 380559 28819330 ~ 28826708 (-) False LOC110501699
TU2055631 other downstream 100294 28334224 ~ 28334621 (-) True G1796204
TU2055220 other downstream 422225 28009655 ~ 28012690 (-) True LOC110501691
TU2055231 other downstream 453536 27980664 ~ 27981379 (-) True G1795850
TU2055049 other downstream 691316 27741372 ~ 27743599 (-) False LOC110501685
TU2055050 other downstream 691316 27741372 ~ 27743599 (-) True LOC110501685
TU2055842 other upstream 187367 28626138 ~ 28626891 (-) True G1796401
TU2056199 other upstream 387516 28826287 ~ 28826645 (-) True LOC110501699
TU2056693 other upstream 772893 29211664 ~ 29243649 (-) False G1797146
TU2056696 other upstream 772893 29211664 ~ 29243649 (-) True G1797146
TU2057122 other upstream 1220696 29659467 ~ 29660947 (-) True G1797556

Expression Profile