Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2058456 |
| length | 252 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G1798769 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 30133738 ~ 30137205 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2058410 | lncRNA | downstream | 66083 | 30067429 ~ 30067655 (-) | True | G1798731 |
| TU2057579 | lncRNA | downstream | 130522 | 30003013 ~ 30003216 (-) | True | G1797962 |
| TU2057578 | lncRNA | downstream | 132160 | 30001270 ~ 30001578 (-) | True | G1797961 |
| TU2057575 | lncRNA | downstream | 133756 | 29999715 ~ 29999982 (-) | True | G1797958 |
| TU2057551 | lncRNA | downstream | 156179 | 29969971 ~ 29977559 (-) | True | G1797935 |
| TU2058458 | lncRNA | upstream | 3510 | 30140715 ~ 30140938 (-) | True | G1798771 |
| TU2058462 | lncRNA | upstream | 9777 | 30146982 ~ 30147193 (-) | True | G1798775 |
| TU2058396 | lncRNA | upstream | 10665 | 30147870 ~ 30149445 (-) | True | G1798717 |
| TU2058467 | lncRNA | upstream | 22100 | 30159305 ~ 30159593 (-) | True | G1798780 |
| TU2058469 | lncRNA | upstream | 23780 | 30160985 ~ 30161204 (-) | True | G1798782 |
| XM_021579461.2 | mRNA | downstream | 138092 | 29940139 ~ 29995646 (-) | True | LOC110501718 |
| XM_036959070.1 | mRNA | downstream | 140098 | 29940139 ~ 29993640 (-) | False | LOC110501718 |
| XM_021579462.2 | mRNA | downstream | 140099 | 29940139 ~ 29993639 (-) | False | LOC110501718 |
| NM_001124646.1 | mRNA | downstream | 257180 | 29873260 ~ 29876558 (-) | True | pou1f1 |
| XM_021579457.2 | mRNA | downstream | 287282 | 29835498 ~ 29846456 (-) | False | LOC110501714 |
| XM_036959589.1 | mRNA | upstream | 155905 | 30293110 ~ 30322552 (-) | False | mxra5b |
| XM_021579473.2 | mRNA | upstream | 227400 | 30364605 ~ 30382857 (-) | True | LOC110501725 |
| XM_021579476.2 | mRNA | upstream | 261970 | 30399175 ~ 30402935 (-) | False | mab21l3 |
| XM_036959096.1 | mRNA | upstream | 261970 | 30399175 ~ 30402935 (-) | False | mab21l3 |
| XR_005038817.1 | mRNA | upstream | 262233 | 30399438 ~ 30402064 (-) | False | mab21l3 |
| TU2058411 | other | downstream | 61974 | 30071075 ~ 30071764 (-) | True | G1798732 |
| TU2057553 | other | downstream | 155203 | 29971558 ~ 29978535 (-) | True | G1797936 |
| TU2057451 | other | downstream | 290558 | 29838277 ~ 29843180 (-) | True | LOC110501714 |
| TU2057122 | other | downstream | 472791 | 29659467 ~ 29660947 (-) | True | G1797556 |
| TU2056693 | other | downstream | 890089 | 29211664 ~ 29243649 (-) | False | G1797146 |
| TU2058468 | other | upstream | 23029 | 30160234 ~ 30160686 (-) | True | G1798781 |
| TU2058565 | other | upstream | 349784 | 30486989 ~ 30519672 (-) | True | G1798869 |
| TU2058911 | other | upstream | 823882 | 30961087 ~ 30963534 (-) | False | LOC110502090 |
| TU2058912 | other | upstream | 823882 | 30961087 ~ 30963534 (-) | True | LOC110502090 |
| TU2058850 | other | upstream | 839689 | 30976894 ~ 30995302 (-) | True | G1799132 |
