RNA id: TU2067481



Basic Information


Item Value
RNA id TU2067481
length 316
lncRNA type antisense_over
GC content 0.59
exon number 2
gene id G1807088
representative False

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37908830 ~ 37912450 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttggtttagtaactgaccatagtagcaggcccagtgcagtaagttggtttagtaactgaccgtagtagcagGCCCAGTGCAGGGGGGTGGTTTAGtaactgaccatagtagcaggcccagtgcAGGGGGGTGTACCCCTGGTGGTCTCGGAGGGGGGGCGTGGGCAGTTCAGAACAGGCCATACTCAGCAGCTCAGCGAGCCAGGATGCGTGGCCCTTCGCTGCAGCCAGATGGAGGGCTGTTCGGCCCCTGGAGTCCCCCAGCAACACAGAGGCCTCCTGCTCCAACAGACACTGAACACACTCCTCCTGACCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2067244 lncRNA upstream 58451 37850278 ~ 37850545 (+) True G1806883
TU2067243 lncRNA upstream 59984 37848785 ~ 37849012 (+) True G1806882
TU2067242 lncRNA upstream 60356 37848027 ~ 37848640 (+) True G1806881
TU2067120 lncRNA upstream 256805 37645788 ~ 37652191 (+) True G1806785
TU2067037 lncRNA upstream 369356 37539406 ~ 37539640 (+) True G1806716
TU2067482 lncRNA downstream 559 37913009 ~ 37913740 (+) True G1807089
TU2067527 lncRNA downstream 57912 37970362 ~ 37971174 (+) True G1807134
TU2067532 lncRNA downstream 62746 37975196 ~ 38006133 (+) True G1807138
TU2067630 lncRNA downstream 197760 38110210 ~ 38111033 (+) True G1807226
TU2067652 lncRNA downstream 230301 38142751 ~ 38143249 (+) True G1807247
XM_036959250.1 mRNA upstream 6128 37862364 ~ 37902868 (+) False LOC110501832
XM_021579685.2 mRNA downstream 83635 37996085 ~ 38004691 (+) True coq10b
XM_036959267.1 mRNA downstream 99399 38011849 ~ 38015731 (+) False LOC110501840
XM_021579688.2 mRNA downstream 99554 38012004 ~ 38015731 (+) True LOC110501840
XM_036958497.1 mRNA downstream 99554 38012004 ~ 38029034 (+) False mob3
XM_021578579.2 mRNA downstream 110417 38022867 ~ 38029035 (+) False mob3
TU2065389 other upstream 1465919 36435000 ~ 36443077 (+) True LOC110501805
TU2065354 other upstream 1545066 36363596 ~ 36363930 (+) True G1805191
TU2064995 other upstream 2033544 35874562 ~ 35875452 (+) True G1804873
TU2064746 other upstream 2149570 35740439 ~ 35759426 (+) False LOC110501795
TU2060607 other upstream 4994814 32910793 ~ 32914182 (+) True G1800754
TU2067606 other downstream 167416 38079866 ~ 38186629 (+) True LOC110501842
TU2067723 other downstream 386677 38299127 ~ 38302575 (+) False G1807306
TU2067724 other downstream 386677 38299127 ~ 38316253 (+) False G1807306
TU2067728 other downstream 386677 38299127 ~ 38302575 (+) False G1807306
TU2067729 other downstream 386677 38299127 ~ 38316253 (+) False G1807306

Expression Profile