RNA id: TCONS_00004918


Basic Information

Item Value
RNA id TCONS_00004918
length 117
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_002646
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 13607027 ~ 13607143 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

agtcacagccatatcaccctgctgcccaagaccagttactcactgaagaaaagcagggctgagcctggtcagtacctgaatggaacaccacatgggaaaactaggttgcttttAGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192880

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006012 lncRNA downstream 305054 13298839 ~ 13301973 (-) True XLOC_002642
TCONS_00006011 lncRNA downstream 1708452 11895373 ~ 11898575 (-) True XLOC_002638
TCONS_00004895 lncRNA downstream 2273914 11331969 ~ 11333113 (-) False XLOC_002632
TCONS_00006010 lncRNA downstream 2819378 10784334 ~ 10787649 (-) True XLOC_002626
TCONS_00006009 lncRNA downstream 2892800 10712178 ~ 10714227 (-) True XLOC_002625
TCONS_00006013 lncRNA upstream 1423863 15031006 ~ 15042748 (-) True XLOC_002656
TCONS_00006014 lncRNA upstream 1425829 15032972 ~ 15034960 (-) True XLOC_002657
TCONS_00004942 lncRNA upstream 1475267 15082410 ~ 15084047 (-) False XLOC_002660
TCONS_00004943 lncRNA upstream 1475267 15082410 ~ 15086297 (-) False XLOC_002660
TCONS_00005751 lncRNA upstream 1476451 15083594 ~ 15083896 (-) True XLOC_002660
TCONS_00004915 mRNA downstream 210307 13305627 ~ 13396720 (-) True XLOC_002644
TCONS_00004914 mRNA downstream 263196 13305610 ~ 13343831 (-) False XLOC_002644
TCONS_00004912 mRNA downstream 367660 13236100 ~ 13239367 (-) True XLOC_002641
TCONS_00004911 mRNA downstream 428041 13141161 ~ 13178986 (-) True XLOC_002640
TCONS_00004910 mRNA downstream 428107 13090156 ~ 13178920 (-) False XLOC_002640
TCONS_00004921 mRNA upstream 656541 14263684 ~ 14488518 (-) False XLOC_002649
TCONS_00004923 mRNA upstream 813821 14420964 ~ 14488472 (-) True XLOC_002649
TCONS_00004924 mRNA upstream 918041 14525184 ~ 14536399 (-) False XLOC_002650
TCONS_00004925 mRNA upstream 922664 14529807 ~ 14540443 (-) True XLOC_002650
TCONS_00004926 mRNA upstream 935583 14542726 ~ 14545658 (-) True XLOC_002651
TCONS_00004913 other downstream 301844 13305065 ~ 13305183 (-) True XLOC_002643
TCONS_00004903 other downstream 1842588 11761380 ~ 11764439 (-) True XLOC_002636
TCONS_00004879 other downstream 3274600 10319308 ~ 10332427 (-) False XLOC_002623
TCONS_00004880 other downstream 3277473 10329464 ~ 10329554 (-) True XLOC_002623
TCONS_00004869 other downstream 4068701 9534782 ~ 9538326 (-) False XLOC_002618
TCONS_00004919 other upstream 4990 13612133 ~ 13612248 (-) True XLOC_002647
TCONS_00004920 other upstream 324426 13931569 ~ 13931696 (-) True XLOC_002648
TCONS_00004922 other upstream 719683 14326826 ~ 14488154 (-) False XLOC_002649
TCONS_00004928 other upstream 1125140 14732283 ~ 14732399 (-) True XLOC_002653
TCONS_00004937 other upstream 1330684 14937827 ~ 14940346 (-) True XLOC_002655