RNA id: TCONS_00051636


Basic Information

Item Value
RNA id TCONS_00051636
length 405
RNA type mRNA
GC content 0.47
exon number 4
gene id XLOC_026496
representative True

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 32977861 ~ 32981430 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tggttcgatcctcggctcagttggtgtttctgtCctgtgaaaatatgtgttttatctACTCTGTCAGACATTAGACTGGTCGATGGGTTTGATTCATGCTGTGGACGAGTAGAGATCCACCACAGTGGTCAGTGGGGAAGCGTGTGTGATGATAACTGGGACATGAATGATGCTGCTGTGGTGTGCAGACAGTTACAGTGTGGATCAGCCATCAGTGCACCTCATAGTGCCGCATTTGGTCCAGGCAGTGGATCTATCTGGCTGGATGAGGTTCAGTGTACGGGAAGTGAAGGAACTCTCATTCAATGTTCACACGATGGACTGGGAAAACATAACTGTAATCATGATGCAGGAGTTGTCTGCACACAGGGTAAAGAGGAATCTGATTTTCTGAGGTCCAACTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000193370

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00051626 lncRNA downstream 52364 32924539 ~ 32925497 (-) False XLOC_026492
TCONS_00053063 lncRNA downstream 118514 32855161 ~ 32859347 (-) True XLOC_026488
TCONS_00051608 lncRNA downstream 374670 32598644 ~ 32603191 (-) True XLOC_026483
TCONS_00051605 lncRNA downstream 405809 32565194 ~ 32572052 (-) False XLOC_026481
TCONS_00051645 lncRNA upstream 102558 33083988 ~ 33113683 (-) False XLOC_026498
TCONS_00051646 lncRNA upstream 102558 33083988 ~ 33259621 (-) True XLOC_026498
TCONS_00053064 lncRNA upstream 318764 33300194 ~ 33301311 (-) False XLOC_026499
TCONS_00051647 lncRNA upstream 318988 33300418 ~ 33304123 (-) True XLOC_026499
TCONS_00051648 lncRNA upstream 362646 33344076 ~ 33345247 (-) True XLOC_026500
TCONS_00051633 mRNA downstream 4307 32969204 ~ 32973554 (-) False XLOC_026495
TCONS_00051634 mRNA downstream 4350 32969767 ~ 32973511 (-) False XLOC_026495
TCONS_00051632 mRNA downstream 12013 32961488 ~ 32965848 (-) True XLOC_026494
TCONS_00051629 mRNA downstream 19287 32954169 ~ 32958574 (-) False XLOC_026493
TCONS_00051630 mRNA downstream 19356 32954575 ~ 32958505 (-) False XLOC_026493
TCONS_00051638 mRNA upstream 11611 32993041 ~ 33009111 (-) False XLOC_026497
TCONS_00051639 mRNA upstream 12017 32993447 ~ 33030727 (-) False XLOC_026497
TCONS_00051640 mRNA upstream 23023 33004453 ~ 33029938 (-) False XLOC_026497
TCONS_00051641 mRNA upstream 23594 33005024 ~ 33031799 (-) False XLOC_026497
TCONS_00051642 mRNA upstream 24756 33006186 ~ 33029426 (-) True XLOC_026497
TCONS_00051635 other downstream 4327 32972974 ~ 32973534 (-) True XLOC_026495
TCONS_00051585 other downstream 790476 32186134 ~ 32187385 (-) False XLOC_026474
TCONS_00051529 other downstream 2177203 30800541 ~ 30800658 (-) True XLOC_026441
TCONS_00051520 other downstream 2489767 30454353 ~ 30488094 (-) False XLOC_026436
TCONS_00051482 other downstream 3107737 29868899 ~ 29870124 (-) True XLOC_026416
TCONS_00051656 other upstream 442762 33424192 ~ 33424328 (-) True XLOC_026505
TCONS_00051678 other upstream 967239 33948669 ~ 33948788 (-) True XLOC_026513
TCONS_00051702 other upstream 1041735 34023165 ~ 34023613 (-) True XLOC_026529
TCONS_00051708 other upstream 1053762 34035192 ~ 34035631 (-) True XLOC_026534
TCONS_00051712 other upstream 1056051 34037481 ~ 34037881 (-) True XLOC_026535

Expression Profile

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