RNA id: TCONS_00051640


Basic Information

Item Value
RNA id TCONS_00051640
length 1743
RNA type mRNA
GC content 0.46
exon number 7
gene id XLOC_026497
representative False

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 32979969 ~ 33031799 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATTAGATTGGTTGGTGGGAATTATTCATGCTCTGGGAGAGTGGAGATCCTGTATAACGGCATGTGGGGAACCGTGTGTGATGATGACTGGGACATGAATAATGCTGCTGTGGTGTGCAGACAGATGGGATGTGGTGGAGCTGTCAGTGCACCACAGAGGGCTTCTTTTGGCCAGGGAAATGGTCGAATCTGGTTGGATGATGTCAGATGTTCAGGACAGGAATTCTCCCTCACAAACTGCTCACACCGTGGTTTTGGAGAACATGACTGTGGACACCATGAAGATGCAGGAGTTGTCTGCTTAGACATTAGACTGGTCGATGGGTTGGATTCATGCTGTGGACGAGTGGAGATCCACCACAATGGTGTGTGGGGAAGTGTGTGTAATGATAACTGGGACATGAATGATGCTGCTGTGGTGTGCAGACAGTTACAGTGTGGATCAGCCATTAGTGCACCTCATAGTGCTGCATTTGGTCCAGGCAATGGATCTATCTGGCTGGATGAGGTTAACTGTACAGGAAGCGAGACACGACTAACTCAGTGCTCACACAGTGGACTGGGCAATCATAACTGTGATCACAGCAAAGATGCTGGTGTTGTTTGTTATGGATTTTCTCTCAGACTGGTGAATGGTACTAATGACTGCTCTGGTAGAGTGGAAATCCTTTATAATGGCACGTGGGGAACCGTGCGTGATGATAACTGGGACATGAAAGATGCTGCTGTGGTGTGCAGACAGATGGGATGTGGAGGAGCTGTTAGTGCACCAAATAATGTTTCTTTTGGCCAGGGAAGTGGTCCGATTTGGTTGAATAATGTCAGATGTTCAGGAAATGAATCCTCCCTTAGAGACTGCTCACATCATGGTTTTGGAGTAAATAACTCTAGACATTATGAAGATGCTGGAGTTGTCTGCTTAAAGGACATTAGATTGGTTGGTGGGTTTCATTCTTGCTCTGGGAGAGTGGAGATCCTGTATAATGGCACGTGGGGAACCGTGCGGGATGATAACTGGGACATGAAAGATGCTGCTGTGGTGTGCAGACAGATGGGATGTGGAGGAGCTGTTAGTGCACCAAATAATGTTTCTTTCGGCCGGGGAAGTGGTCCGATCTGGTTAAATAATGTGAGATGTTCAGGAAATGAATCCTCCCTTAGAGACTGCTCACATCATGGTTTTGGAGTAAATAACTCTAGACATTATGAAGATGCTGGAGTTGTCTGCTTAAAGGACATTAGATTGGTTGGTGGGTTTCATTCTTGCTCTGGGAGAGTGGAGATCCTGTATAACGGCACGTGGGGAACCGTGTGTGATGATGACTGGGACATGAATGATGCTGCTGTGGTGTGCAGACAGATGGGATGTGGAGAAGCTATTAGTAAAGAAAGTGATGCTTCTTTTGGCCTGGAAAGTGGTCAGATCTGGTTGGATGGTGTGAGATGTTCAGGAAGTGAATCTACACTCAGAGACTGCTCACACCGTGGTTTTggagtaaataactgtaaacacCAAAAATATGCAGGAGTTGTCTGCTTAGACATTAGATTGGTTGGTGGGTTTCATTCATGCTCTGGGAGAGTGGAGATCCTGTATAACAGCACGTGGGGAACCGTGTGTGATGATGACTGGGACATGAATGATGCTGCTGTGGTGTGCAGACAGATGGGATGTGGAAGAGCTGTCAGTGCACCACAGAGTGCTTCTTTTGAAAATACATCTATAATCTTGCAAAGATATTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000181730

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00051626 lncRNA downstream 78956 32924539 ~ 32925497 (-) False XLOC_026492
TCONS_00053063 lncRNA downstream 145106 32855161 ~ 32859347 (-) True XLOC_026488
TCONS_00051608 lncRNA downstream 401262 32598644 ~ 32603191 (-) True XLOC_026483
TCONS_00051605 lncRNA downstream 432401 32565194 ~ 32572052 (-) False XLOC_026481
TCONS_00051645 lncRNA upstream 54050 33083988 ~ 33113683 (-) False XLOC_026498
TCONS_00051646 lncRNA upstream 54050 33083988 ~ 33259621 (-) True XLOC_026498
TCONS_00053064 lncRNA upstream 270256 33300194 ~ 33301311 (-) False XLOC_026499
TCONS_00051647 lncRNA upstream 270480 33300418 ~ 33304123 (-) True XLOC_026499
TCONS_00051648 lncRNA upstream 314138 33344076 ~ 33345247 (-) True XLOC_026500
TCONS_00051636 mRNA downstream 23023 32977861 ~ 32981430 (-) True XLOC_026496
TCONS_00051633 mRNA downstream 30899 32969204 ~ 32973554 (-) False XLOC_026495
TCONS_00051634 mRNA downstream 30942 32969767 ~ 32973511 (-) False XLOC_026495
TCONS_00051632 mRNA downstream 38605 32961488 ~ 32965848 (-) True XLOC_026494
TCONS_00051631 mRNA downstream 46751 32954875 ~ 32957702 (-) True XLOC_026493
TCONS_00051643 mRNA upstream 35675 33065613 ~ 33175583 (-) False XLOC_026498
TCONS_00051644 mRNA upstream 36066 33066004 ~ 33113879 (-) False XLOC_026498
TCONS_00051649 mRNA upstream 359085 33389023 ~ 33395233 (-) True XLOC_026501
TCONS_00051650 mRNA upstream 366004 33395942 ~ 33417826 (-) False XLOC_026502
TCONS_00051652 mRNA upstream 390276 33420214 ~ 33422738 (-) False XLOC_026503
TCONS_00051635 other downstream 30919 32972974 ~ 32973534 (-) True XLOC_026495
TCONS_00051585 other downstream 817068 32186134 ~ 32187385 (-) False XLOC_026474
TCONS_00051529 other downstream 2203795 30800541 ~ 30800658 (-) True XLOC_026441
TCONS_00051520 other downstream 2516359 30454353 ~ 30488094 (-) False XLOC_026436
TCONS_00051482 other downstream 3134329 29868899 ~ 29870124 (-) True XLOC_026416
TCONS_00051656 other upstream 394254 33424192 ~ 33424328 (-) True XLOC_026505
TCONS_00051678 other upstream 918731 33948669 ~ 33948788 (-) True XLOC_026513
TCONS_00051702 other upstream 993227 34023165 ~ 34023613 (-) True XLOC_026529
TCONS_00051708 other upstream 1005254 34035192 ~ 34035631 (-) True XLOC_026534
TCONS_00051712 other upstream 1007543 34037481 ~ 34037881 (-) True XLOC_026535

Expression Profile

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