RNA id: TCONS_00004919


Basic Information

Item Value
RNA id TCONS_00004919
length 116
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_002647
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 13612133 ~ 13612248 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACTGGCAGCTGCTGTAGCTCTGCAATACACATGGTTgtccactaaagctaagcagggctgcacctggtcagAACCTGGATGGAAGTACACATAGGAATACATGGTTGCTgctagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176921

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006012 lncRNA downstream 310160 13298839 ~ 13301973 (-) True XLOC_002642
TCONS_00006011 lncRNA downstream 1713558 11895373 ~ 11898575 (-) True XLOC_002638
TCONS_00004895 lncRNA downstream 2279020 11331969 ~ 11333113 (-) False XLOC_002632
TCONS_00006010 lncRNA downstream 2824484 10784334 ~ 10787649 (-) True XLOC_002626
TCONS_00006009 lncRNA downstream 2897906 10712178 ~ 10714227 (-) True XLOC_002625
TCONS_00006013 lncRNA upstream 1418758 15031006 ~ 15042748 (-) True XLOC_002656
TCONS_00006014 lncRNA upstream 1420724 15032972 ~ 15034960 (-) True XLOC_002657
TCONS_00004942 lncRNA upstream 1470162 15082410 ~ 15084047 (-) False XLOC_002660
TCONS_00004943 lncRNA upstream 1470162 15082410 ~ 15086297 (-) False XLOC_002660
TCONS_00005751 lncRNA upstream 1471346 15083594 ~ 15083896 (-) True XLOC_002660
TCONS_00004915 mRNA downstream 215413 13305627 ~ 13396720 (-) True XLOC_002644
TCONS_00004914 mRNA downstream 268302 13305610 ~ 13343831 (-) False XLOC_002644
TCONS_00004912 mRNA downstream 372766 13236100 ~ 13239367 (-) True XLOC_002641
TCONS_00004911 mRNA downstream 433147 13141161 ~ 13178986 (-) True XLOC_002640
TCONS_00004910 mRNA downstream 433213 13090156 ~ 13178920 (-) False XLOC_002640
TCONS_00004921 mRNA upstream 651436 14263684 ~ 14488518 (-) False XLOC_002649
TCONS_00004923 mRNA upstream 808716 14420964 ~ 14488472 (-) True XLOC_002649
TCONS_00004924 mRNA upstream 912936 14525184 ~ 14536399 (-) False XLOC_002650
TCONS_00004925 mRNA upstream 917559 14529807 ~ 14540443 (-) True XLOC_002650
TCONS_00004926 mRNA upstream 930478 14542726 ~ 14545658 (-) True XLOC_002651
TCONS_00004918 other downstream 4990 13607027 ~ 13607143 (-) True XLOC_002646
TCONS_00004913 other downstream 306950 13305065 ~ 13305183 (-) True XLOC_002643
TCONS_00004903 other downstream 1847694 11761380 ~ 11764439 (-) True XLOC_002636
TCONS_00004879 other downstream 3279706 10319308 ~ 10332427 (-) False XLOC_002623
TCONS_00004880 other downstream 3282579 10329464 ~ 10329554 (-) True XLOC_002623
TCONS_00004920 other upstream 319321 13931569 ~ 13931696 (-) True XLOC_002648
TCONS_00004922 other upstream 714578 14326826 ~ 14488154 (-) False XLOC_002649
TCONS_00004928 other upstream 1120035 14732283 ~ 14732399 (-) True XLOC_002653
TCONS_00004937 other upstream 1325579 14937827 ~ 14940346 (-) True XLOC_002655
TCONS_00004948 other upstream 1725062 15337310 ~ 15340332 (-) False XLOC_002662

Expression Profile

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