Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00051647 |
| length | 754 |
| lncRNA type | antisense |
| GC content | 0.49 |
| exon number | 3 |
| gene id | XLOC_026499 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 33300194 ~ 33304123 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0098534 | centriole assembly | biological_process |
| GO:0034470 | ncRNA processing | biological_process |
| GO:0006399 | tRNA metabolic process | biological_process |
| GO:0006400 | tRNA modification | biological_process |
| GO:0007099 | centriole replication | biological_process |
| GO:0009451 | RNA modification | biological_process |
| GO:0008033 | tRNA processing | biological_process |
| GO:0034660 | ncRNA metabolic process | biological_process |
| GO:0140101 | catalytic activity, acting on a tRNA | molecular_function |
| ensembl_id | ENSDART00000161607 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00051646 | lncRNA | downstream | 40797 | 33083988 ~ 33259621 (-) | True | XLOC_026498 |
| TCONS_00051645 | lncRNA | downstream | 186735 | 33083988 ~ 33113683 (-) | False | XLOC_026498 |
| TCONS_00051626 | lncRNA | downstream | 374921 | 32924539 ~ 32925497 (-) | False | XLOC_026492 |
| TCONS_00053063 | lncRNA | downstream | 441071 | 32855161 ~ 32859347 (-) | True | XLOC_026488 |
| TCONS_00051608 | lncRNA | downstream | 697227 | 32598644 ~ 32603191 (-) | True | XLOC_026483 |
| TCONS_00051648 | lncRNA | upstream | 39953 | 33344076 ~ 33345247 (-) | True | XLOC_026500 |
| TCONS_00051651 | lncRNA | upstream | 92582 | 33396705 ~ 33398537 (-) | True | XLOC_026502 |
| TCONS_00051653 | lncRNA | upstream | 116096 | 33420219 ~ 33422734 (-) | True | XLOC_026503 |
| TCONS_00051655 | lncRNA | upstream | 119901 | 33424024 ~ 33426932 (-) | False | XLOC_026504 |
| TCONS_00051657 | lncRNA | upstream | 121422 | 33425545 ~ 33427584 (-) | True | XLOC_026504 |
| TCONS_00051643 | mRNA | downstream | 124835 | 33065613 ~ 33175583 (-) | False | XLOC_026498 |
| TCONS_00051644 | mRNA | downstream | 186539 | 33066004 ~ 33113879 (-) | False | XLOC_026498 |
| TCONS_00051641 | mRNA | downstream | 268619 | 33005024 ~ 33031799 (-) | False | XLOC_026497 |
| TCONS_00051639 | mRNA | downstream | 269691 | 32993447 ~ 33030727 (-) | False | XLOC_026497 |
| TCONS_00051649 | mRNA | upstream | 84900 | 33389023 ~ 33395233 (-) | True | XLOC_026501 |
| TCONS_00051650 | mRNA | upstream | 91819 | 33395942 ~ 33417826 (-) | False | XLOC_026502 |
| TCONS_00051652 | mRNA | upstream | 116091 | 33420214 ~ 33422738 (-) | False | XLOC_026503 |
| TCONS_00051654 | mRNA | upstream | 119863 | 33423986 ~ 33427803 (-) | False | XLOC_026504 |
| TCONS_00051658 | mRNA | upstream | 128068 | 33432191 ~ 33437796 (-) | False | XLOC_026506 |
| TCONS_00051635 | other | downstream | 326884 | 32972974 ~ 32973534 (-) | True | XLOC_026495 |
| TCONS_00051585 | other | downstream | 1113033 | 32186134 ~ 32187385 (-) | False | XLOC_026474 |
| TCONS_00051529 | other | downstream | 2499760 | 30800541 ~ 30800658 (-) | True | XLOC_026441 |
| TCONS_00051520 | other | downstream | 2812324 | 30454353 ~ 30488094 (-) | False | XLOC_026436 |
| TCONS_00051482 | other | downstream | 3430294 | 29868899 ~ 29870124 (-) | True | XLOC_026416 |
| TCONS_00051656 | other | upstream | 120069 | 33424192 ~ 33424328 (-) | True | XLOC_026505 |
| TCONS_00051678 | other | upstream | 644546 | 33948669 ~ 33948788 (-) | True | XLOC_026513 |
| TCONS_00051702 | other | upstream | 719042 | 34023165 ~ 34023613 (-) | True | XLOC_026529 |
| TCONS_00051708 | other | upstream | 731069 | 34035192 ~ 34035631 (-) | True | XLOC_026534 |
| TCONS_00051712 | other | upstream | 733358 | 34037481 ~ 34037881 (-) | True | XLOC_026535 |
