RNA id: TCONS_00004920


Basic Information

Item Value
RNA id TCONS_00004920
length 128
RNA type rRNA
GC content 0.52
exon number 1
gene id XLOC_002648
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 13931569 ~ 13931696 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ttccacaatacTAACAACTTGGTATTaatctgcaactctcacatggtcgcccactgaagctaagcagggctgcgcccggtcagtacctggatgggagaccacatgggaaagctaggttgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000119833

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006012 lncRNA downstream 629596 13298839 ~ 13301973 (-) True XLOC_002642
TCONS_00006011 lncRNA downstream 2032994 11895373 ~ 11898575 (-) True XLOC_002638
TCONS_00004895 lncRNA downstream 2598456 11331969 ~ 11333113 (-) False XLOC_002632
TCONS_00006010 lncRNA downstream 3143920 10784334 ~ 10787649 (-) True XLOC_002626
TCONS_00006009 lncRNA downstream 3217342 10712178 ~ 10714227 (-) True XLOC_002625
TCONS_00006013 lncRNA upstream 1099310 15031006 ~ 15042748 (-) True XLOC_002656
TCONS_00006014 lncRNA upstream 1101276 15032972 ~ 15034960 (-) True XLOC_002657
TCONS_00004942 lncRNA upstream 1150714 15082410 ~ 15084047 (-) False XLOC_002660
TCONS_00004943 lncRNA upstream 1150714 15082410 ~ 15086297 (-) False XLOC_002660
TCONS_00005751 lncRNA upstream 1151898 15083594 ~ 15083896 (-) True XLOC_002660
TCONS_00004917 mRNA downstream 158708 13475830 ~ 13772861 (-) True XLOC_002645
TCONS_00004916 mRNA downstream 158722 13460130 ~ 13772847 (-) False XLOC_002645
TCONS_00004915 mRNA downstream 534849 13305627 ~ 13396720 (-) True XLOC_002644
TCONS_00004914 mRNA downstream 587738 13305610 ~ 13343831 (-) False XLOC_002644
TCONS_00004912 mRNA downstream 692202 13236100 ~ 13239367 (-) True XLOC_002641
TCONS_00004921 mRNA upstream 331988 14263684 ~ 14488518 (-) False XLOC_002649
TCONS_00004923 mRNA upstream 489268 14420964 ~ 14488472 (-) True XLOC_002649
TCONS_00004924 mRNA upstream 593488 14525184 ~ 14536399 (-) False XLOC_002650
TCONS_00004925 mRNA upstream 598111 14529807 ~ 14540443 (-) True XLOC_002650
TCONS_00004926 mRNA upstream 611030 14542726 ~ 14545658 (-) True XLOC_002651
TCONS_00004919 other downstream 319321 13612133 ~ 13612248 (-) True XLOC_002647
TCONS_00004918 other downstream 324426 13607027 ~ 13607143 (-) True XLOC_002646
TCONS_00004913 other downstream 626386 13305065 ~ 13305183 (-) True XLOC_002643
TCONS_00004903 other downstream 2167130 11761380 ~ 11764439 (-) True XLOC_002636
TCONS_00004879 other downstream 3599142 10319308 ~ 10332427 (-) False XLOC_002623
TCONS_00004922 other upstream 395130 14326826 ~ 14488154 (-) False XLOC_002649
TCONS_00004928 other upstream 800587 14732283 ~ 14732399 (-) True XLOC_002653
TCONS_00004937 other upstream 1006131 14937827 ~ 14940346 (-) True XLOC_002655
TCONS_00004948 other upstream 1405614 15337310 ~ 15340332 (-) False XLOC_002662
TCONS_00004954 other upstream 1686520 15618216 ~ 15619015 (-) False XLOC_002664