RNA id: TU2075880



Basic Information


Item Value
RNA id TU2075880
length 241
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G1814534
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 44755402 ~ 44755642 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


actatatacagggtcagtaccatattaacaatgtgcagggatactggagtgatggaggtagatatgtataggggggaAGGTGACTACATACAGgctcagttccagtaccatattaacaatgtgcagggatactggagtgatagaggtatgCTGTTATGAAAAAGTAAACTACGTACAGTACAACATCAAGAACTTTAACTGACCATATTTTTTAGCAGTATCTTGGTCTAGTGTTTTTACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2075873 lncRNA downstream 6296 44748867 ~ 44749106 (-) True G1814527
TU2075867 lncRNA downstream 10379 44744124 ~ 44745023 (-) True G1814521
TU2075866 lncRNA downstream 11450 44742772 ~ 44743952 (-) True G1814520
TU2075859 lncRNA downstream 15015 44740133 ~ 44740387 (-) True G1814514
TU2075854 lncRNA downstream 20589 44734611 ~ 44734813 (-) True G1814509
TU2075884 lncRNA upstream 324 44755966 ~ 44756630 (-) True G1814537
TU2075888 lncRNA upstream 5928 44761570 ~ 44761807 (-) True G1814541
TU2075892 lncRNA upstream 8924 44764566 ~ 44764877 (-) True G1814545
TU2075894 lncRNA upstream 10469 44766111 ~ 44766313 (-) True G1814547
TU2075902 lncRNA upstream 15884 44771526 ~ 44771776 (-) True G1814555
XM_036959404.1 mRNA downstream 90539 44659569 ~ 44664863 (-) False LOC110501923
XM_021579797.2 mRNA downstream 90539 44659908 ~ 44664863 (-) False LOC110501923
XM_036959403.1 mRNA downstream 90539 44659908 ~ 44664863 (-) False LOC110501923
XM_021579796.2 mRNA downstream 90539 44661070 ~ 44664863 (-) False LOC110501923
XR_002470302.2 mRNA downstream 119070 44634884 ~ 44636332 (-) True LOC110502136
XM_021579802.2 mRNA upstream 161837 44917479 ~ 44926432 (-) False LOC110501924
XM_021579800.2 mRNA upstream 161837 44917479 ~ 44928069 (-) False LOC110501924
XM_036959405.1 mRNA upstream 161837 44917479 ~ 44928070 (-) False LOC110501924
XM_021579799.2 mRNA upstream 161837 44917479 ~ 44935920 (-) False LOC110501924
XM_021579801.2 mRNA upstream 161837 44917479 ~ 44939556 (-) True LOC110501924
TU2075825 other downstream 81514 44673447 ~ 44673888 (-) True G1814480
TU2075666 other downstream 201982 44510407 ~ 44553420 (-) True LOC110502171
TU2073410 other downstream 2077642 42677257 ~ 42677760 (-) True G1812404
TU2073346 other downstream 2150382 42604703 ~ 42605020 (-) True LOC110502155
TU2073040 other downstream 2366129 42386822 ~ 42389273 (-) True G1812079
TU2077141 other upstream 1083108 45838750 ~ 45840982 (-) True G1815615
TU2078613 other upstream 2469909 47225551 ~ 47226646 (-) True G1816841
TU2078705 other upstream 2645480 47401122 ~ 47402047 (-) True G1816929
TU2079216 other upstream 2715652 47471294 ~ 47473384 (-) True G1817287
TU2079567 other upstream 3306407 48062049 ~ 48063644 (-) True LOC110501953

Expression Profile