RNA id: TU2076699



Basic Information


Item Value
RNA id TU2076699
length 354
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id G1815259
representative True

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45118506 ~ 45119315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


actataacactacgacATTAAAACACgacaacactataacactacgacattaaaacactacaacactataacactacgacattaaaacactacaacactataacactacgacATTAAAACACgacaacactataacactacgacATTAAAACACgacaacactataacactacgacattaaaacactacaacactataacactacgacattaaaacactataacactacgacATTAAAACACTACAACActataacactacgacattaaaacactacaacactataacactacgacATTAAAACACgacaacactataacactacgacATTAAAACACgacaacactataacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2076693 lncRNA downstream 3110 45115087 ~ 45115396 (-) True G1815253
TU2076690 lncRNA downstream 7401 45110415 ~ 45111105 (-) True G1815250
TU2076689 lncRNA downstream 8285 45109731 ~ 45110221 (-) True G1815249
TU2076683 lncRNA downstream 20872 45097390 ~ 45097634 (-) True G1815243
TU2076678 lncRNA downstream 35775 45082262 ~ 45082731 (-) True G1815238
TU2076702 lncRNA upstream 2897 45122212 ~ 45122439 (-) True G1815262
TU2076696 lncRNA upstream 45734 45165049 ~ 45172215 (-) True G1815256
TU2076753 lncRNA upstream 62877 45182192 ~ 45202301 (-) False G1815303
TU2076755 lncRNA upstream 62877 45182192 ~ 45187568 (-) False G1815303
TU2076757 lncRNA upstream 62877 45182192 ~ 45201189 (-) False G1815303
LOC118943612 mRNA downstream 151372 44965636 ~ 44967134 (-) True LOC118943612
XM_021579806.2 mRNA downstream 155627 44959757 ~ 44962879 (-) False LOC110501930
XM_036959406.1 mRNA downstream 162441 44954300 ~ 44956065 (-) True LOC110501928
XM_021579804.2 mRNA downstream 168136 44947662 ~ 44950370 (-) True LOC110501926
XM_021579805.2 mRNA downstream 173219 44943212 ~ 44945287 (-) True LOC110501927
XM_036959415.1 mRNA upstream 245175 45364490 ~ 45365813 (-) False LOC110502174
XM_036959084.1 mRNA upstream 300570 45419885 ~ 45432246 (-) True LOC118943595
XM_021579814.2 mRNA upstream 337911 45457226 ~ 45458628 (-) True LOC110501936
XM_036959416.1 mRNA upstream 400532 45519847 ~ 45520832 (-) True LOC118943614
XM_021579813.2 mRNA upstream 413782 45533097 ~ 45543990 (-) True LOC110501935
TU2075825 other downstream 444618 44673447 ~ 44673888 (-) True G1814480
TU2075666 other downstream 565086 44510407 ~ 44553420 (-) True LOC110502171
TU2073410 other downstream 2440746 42677257 ~ 42677760 (-) True G1812404
TU2073346 other downstream 2513486 42604703 ~ 42605020 (-) True LOC110502155
TU2073040 other downstream 2729233 42386822 ~ 42389273 (-) True G1812079
TU2077141 other upstream 719435 45838750 ~ 45840982 (-) True G1815615
TU2078613 other upstream 2106236 47225551 ~ 47226646 (-) True G1816841
TU2078705 other upstream 2281807 47401122 ~ 47402047 (-) True G1816929
TU2079216 other upstream 2351979 47471294 ~ 47473384 (-) True G1817287
TU2079567 other upstream 2942734 48062049 ~ 48063644 (-) True LOC110501953

Expression Profile