RNA id: TCONS_00004928


Basic Information

Item Value
RNA id TCONS_00004928
length 117
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_002653
representative True

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 14732283 ~ 14732399 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCCATTAGCTCTACCTCtgtgcaactctcacatggttgcccactgaagctaagcagggctgcaccaggtcagtacctggatgggagaccacatgggaatgctaggttgctgccagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000175232

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00006012 lncRNA downstream 1430310 13298839 ~ 13301973 (-) True XLOC_002642
TCONS_00006011 lncRNA downstream 2833708 11895373 ~ 11898575 (-) True XLOC_002638
TCONS_00004895 lncRNA downstream 3399170 11331969 ~ 11333113 (-) False XLOC_002632
TCONS_00006010 lncRNA downstream 3944634 10784334 ~ 10787649 (-) True XLOC_002626
TCONS_00006009 lncRNA downstream 4018056 10712178 ~ 10714227 (-) True XLOC_002625
TCONS_00006013 lncRNA upstream 298607 15031006 ~ 15042748 (-) True XLOC_002656
TCONS_00006014 lncRNA upstream 300573 15032972 ~ 15034960 (-) True XLOC_002657
TCONS_00004942 lncRNA upstream 350011 15082410 ~ 15084047 (-) False XLOC_002660
TCONS_00004943 lncRNA upstream 350011 15082410 ~ 15086297 (-) False XLOC_002660
TCONS_00005751 lncRNA upstream 351195 15083594 ~ 15083896 (-) True XLOC_002660
TCONS_00004927 mRNA downstream 175305 14547941 ~ 14556978 (-) True XLOC_002652
TCONS_00004926 mRNA downstream 186625 14542726 ~ 14545658 (-) True XLOC_002651
TCONS_00004925 mRNA downstream 191840 14529807 ~ 14540443 (-) True XLOC_002650
TCONS_00004924 mRNA downstream 195884 14525184 ~ 14536399 (-) False XLOC_002650
TCONS_00004921 mRNA downstream 243765 14263684 ~ 14488518 (-) False XLOC_002649
TCONS_00004930 mRNA upstream 138737 14871136 ~ 14929659 (-) False XLOC_002654
TCONS_00004929 mRNA upstream 138737 14871136 ~ 14929659 (-) False XLOC_002654
TCONS_00004931 mRNA upstream 140533 14872932 ~ 14929630 (-) False XLOC_002654
TCONS_00004932 mRNA upstream 140706 14873105 ~ 14929679 (-) False XLOC_002654
TCONS_00004933 mRNA upstream 140785 14873184 ~ 14920989 (-) False XLOC_002654
TCONS_00004922 other downstream 244129 14326826 ~ 14488154 (-) False XLOC_002649
TCONS_00004920 other downstream 800587 13931569 ~ 13931696 (-) True XLOC_002648
TCONS_00004919 other downstream 1120035 13612133 ~ 13612248 (-) True XLOC_002647
TCONS_00004918 other downstream 1125140 13607027 ~ 13607143 (-) True XLOC_002646
TCONS_00004913 other downstream 1427100 13305065 ~ 13305183 (-) True XLOC_002643
TCONS_00004937 other upstream 205428 14937827 ~ 14940346 (-) True XLOC_002655
TCONS_00004948 other upstream 604911 15337310 ~ 15340332 (-) False XLOC_002662
TCONS_00004954 other upstream 885817 15618216 ~ 15619015 (-) False XLOC_002664
TCONS_00004975 other upstream 2345034 17077433 ~ 17083377 (-) False XLOC_002675
TCONS_00004978 other upstream 2371899 17104298 ~ 17132910 (-) True XLOC_002678